Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF220Q5VTB9 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF220Q5VTB9 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF220Q5VTB9 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF220Q5VTB9 MST1L-201ENST00000442552 2185 ntBASIC17.7■□□□□ 0.42
RNF220Q5VTB9 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF220Q5VTB9 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF220Q5VTB9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF220Q5VTB9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RNF220Q5VTB9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF220Q5VTB9 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF220Q5VTB9 AL162741.1-201ENST00000565563 1558 ntBASIC17.7■□□□□ 0.42
RNF220Q5VTB9 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RNF220Q5VTB9 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF220Q5VTB9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF220Q5VTB9 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF220Q5VTB9 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF220Q5VTB9 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF220Q5VTB9 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF220Q5VTB9 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF220Q5VTB9 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
RNF220Q5VTB9 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF220Q5VTB9 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF220Q5VTB9 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF220Q5VTB9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF220Q5VTB9 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF220Q5VTB9 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF220Q5VTB9 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF220Q5VTB9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF220Q5VTB9 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF220Q5VTB9 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
RNF220Q5VTB9 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF220Q5VTB9 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF220Q5VTB9 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF220Q5VTB9 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF220Q5VTB9 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RNF220Q5VTB9 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RNF220Q5VTB9 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RNF220Q5VTB9 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RNF220Q5VTB9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF220Q5VTB9 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF220Q5VTB9 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
RNF220Q5VTB9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.68■□□□□ 0.42
RNF220Q5VTB9 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.68■□□□□ 0.42
RNF220Q5VTB9 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF220Q5VTB9 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF220Q5VTB9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF220Q5VTB9 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF220Q5VTB9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF220Q5VTB9 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.68■□□□□ 0.42
RNF220Q5VTB9 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF220Q5VTB9 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.68■□□□□ 0.42
RNF220Q5VTB9 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.68■□□□□ 0.42
RNF220Q5VTB9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF220Q5VTB9 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.68■□□□□ 0.42
RNF220Q5VTB9 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.68■□□□□ 0.42
RNF220Q5VTB9 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF220Q5VTB9 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF220Q5VTB9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF220Q5VTB9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RNF220Q5VTB9 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF220Q5VTB9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF220Q5VTB9 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF220Q5VTB9 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF220Q5VTB9 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.68■□□□□ 0.42
RNF220Q5VTB9 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF220Q5VTB9 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.68■□□□□ 0.42
RNF220Q5VTB9 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RNF220Q5VTB9 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF220Q5VTB9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 AC233263.1-201ENST00000578059 224 ntBASIC17.67■□□□□ 0.42
RNF220Q5VTB9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 HLA-A-209ENST00000638375 975 ntBASIC17.67■□□□□ 0.42
RNF220Q5VTB9 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 IRX1P1-201ENST00000438849 1838 ntBASIC17.67■□□□□ 0.42
RNF220Q5VTB9 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms