Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.74■□□□□ 0.43
RIF1Q5UIP0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.74■□□□□ 0.43
RIF1Q5UIP0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RIF1Q5UIP0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RIF1Q5UIP0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RIF1Q5UIP0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RIF1Q5UIP0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RIF1Q5UIP0 AC026310.3-201ENST00000625186 2373 ntBASIC17.74■□□□□ 0.43
RIF1Q5UIP0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 PGM5P2-202ENST00000637225 1043 ntBASIC17.73■□□□□ 0.43
RIF1Q5UIP0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RIF1Q5UIP0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RIF1Q5UIP0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RIF1Q5UIP0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RIF1Q5UIP0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.72■□□□□ 0.43
RIF1Q5UIP0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RIF1Q5UIP0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.72■□□□□ 0.43
RIF1Q5UIP0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RIF1Q5UIP0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RIF1Q5UIP0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RIF1Q5UIP0 CRYGEP-201ENST00000412192 528 ntBASIC17.72■□□□□ 0.43
RIF1Q5UIP0 AC108073.2-201ENST00000464002 357 ntBASIC17.72■□□□□ 0.43
RIF1Q5UIP0 AC068472.1-201ENST00000474589 881 ntBASIC17.72■□□□□ 0.43
RIF1Q5UIP0 AP005018.1-201ENST00000525475 301 ntBASIC17.72■□□□□ 0.43
RIF1Q5UIP0 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.72■□□□□ 0.43
RIF1Q5UIP0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.72■□□□□ 0.43
RIF1Q5UIP0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.72■□□□□ 0.43
RIF1Q5UIP0 AC092902.6-201ENST00000641783 218 ntBASIC17.72■□□□□ 0.43
RIF1Q5UIP0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RIF1Q5UIP0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RIF1Q5UIP0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.72■□□□□ 0.43
RIF1Q5UIP0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.72■□□□□ 0.43
RIF1Q5UIP0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RIF1Q5UIP0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RIF1Q5UIP0 AC004461.1-201ENST00000412461 403 ntBASIC17.72■□□□□ 0.43
RIF1Q5UIP0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.72■□□□□ 0.43
RIF1Q5UIP0 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RIF1Q5UIP0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.72■□□□□ 0.43
RIF1Q5UIP0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.72■□□□□ 0.43
RIF1Q5UIP0 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.72■□□□□ 0.43
RIF1Q5UIP0 AC004835.2-201ENST00000603762 682 ntBASIC17.72■□□□□ 0.43
RIF1Q5UIP0 AC073592.5-201ENST00000624854 528 ntBASIC17.72■□□□□ 0.43
RIF1Q5UIP0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.72■□□□□ 0.43
RIF1Q5UIP0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RIF1Q5UIP0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
RIF1Q5UIP0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.71■□□□□ 0.43
RIF1Q5UIP0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RIF1Q5UIP0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RIF1Q5UIP0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RIF1Q5UIP0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RIF1Q5UIP0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.71■□□□□ 0.43
RIF1Q5UIP0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.71■□□□□ 0.43
RIF1Q5UIP0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RIF1Q5UIP0 AL358472.5-202ENST00000641448 1267 ntBASIC17.71■□□□□ 0.43
RIF1Q5UIP0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.71■□□□□ 0.43
RIF1Q5UIP0 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RIF1Q5UIP0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RIF1Q5UIP0 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.71■□□□□ 0.42
RIF1Q5UIP0 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.71■□□□□ 0.42
RIF1Q5UIP0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RIF1Q5UIP0 AL390955.2-201ENST00000603032 514 ntBASIC17.71■□□□□ 0.42
RIF1Q5UIP0 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.71■□□□□ 0.42
RIF1Q5UIP0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.7■□□□□ 0.42
RIF1Q5UIP0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RIF1Q5UIP0 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RIF1Q5UIP0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.7■□□□□ 0.42
RIF1Q5UIP0 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.7■□□□□ 0.42
RIF1Q5UIP0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RIF1Q5UIP0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.7■□□□□ 0.42
RIF1Q5UIP0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.7■□□□□ 0.42
RIF1Q5UIP0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RIF1Q5UIP0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms