Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.92■■□□□ 1.1
PDS5AQ29RF7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.92■■□□□ 1.1
PDS5AQ29RF7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.92■■□□□ 1.1
PDS5AQ29RF7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PDS5AQ29RF7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDS5AQ29RF7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDS5AQ29RF7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDS5AQ29RF7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PDS5AQ29RF7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC21.92■■□□□ 1.1
PDS5AQ29RF7 EMBP1-201ENST00000458200 901 ntBASIC21.92■■□□□ 1.1
PDS5AQ29RF7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDS5AQ29RF7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.92■■□□□ 1.1
PDS5AQ29RF7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.92■■□□□ 1.1
PDS5AQ29RF7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.92■■□□□ 1.1
PDS5AQ29RF7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.92■■□□□ 1.1
PDS5AQ29RF7 AL138831.2-201ENST00000606564 490 ntBASIC21.92■■□□□ 1.1
PDS5AQ29RF7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PDS5AQ29RF7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
PDS5AQ29RF7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.92■■□□□ 1.1
PDS5AQ29RF7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDS5AQ29RF7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.92■■□□□ 1.1
PDS5AQ29RF7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PDS5AQ29RF7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.91■■□□□ 1.1
PDS5AQ29RF7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDS5AQ29RF7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
PDS5AQ29RF7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDS5AQ29RF7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDS5AQ29RF7 BX323043.1-201ENST00000641006 1765 ntBASIC21.91■■□□□ 1.1
PDS5AQ29RF7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDS5AQ29RF7 MINOS1P3-201ENST00000457048 203 ntBASIC21.91■■□□□ 1.1
PDS5AQ29RF7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.91■■□□□ 1.1
PDS5AQ29RF7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.91■■□□□ 1.1
PDS5AQ29RF7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.91■■□□□ 1.1
PDS5AQ29RF7 LINC01711-201ENST00000598340 967 ntBASIC21.91■■□□□ 1.1
PDS5AQ29RF7 AC104692.2-201ENST00000603054 253 ntBASIC21.91■■□□□ 1.1
PDS5AQ29RF7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
PDS5AQ29RF7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.91■■□□□ 1.1
PDS5AQ29RF7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
PDS5AQ29RF7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDS5AQ29RF7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDS5AQ29RF7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
PDS5AQ29RF7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDS5AQ29RF7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
PDS5AQ29RF7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.9■■□□□ 1.1
PDS5AQ29RF7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDS5AQ29RF7 AKR1C7P-201ENST00000305623 895 ntBASIC21.9■■□□□ 1.1
PDS5AQ29RF7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDS5AQ29RF7 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.9■■□□□ 1.1
PDS5AQ29RF7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDS5AQ29RF7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDS5AQ29RF7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.9■■□□□ 1.1
PDS5AQ29RF7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.9■■□□□ 1.1
PDS5AQ29RF7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDS5AQ29RF7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.9■■□□□ 1.1
PDS5AQ29RF7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.9■■□□□ 1.1
PDS5AQ29RF7 REXO1L6P-202ENST00000619970 1078 ntBASIC21.9■■□□□ 1.1
PDS5AQ29RF7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDS5AQ29RF7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDS5AQ29RF7 AC005082.1-201ENST00000413042 2259 ntBASIC21.9■■□□□ 1.1
PDS5AQ29RF7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDS5AQ29RF7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDS5AQ29RF7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDS5AQ29RF7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDS5AQ29RF7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDS5AQ29RF7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDS5AQ29RF7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDS5AQ29RF7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PDS5AQ29RF7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PDS5AQ29RF7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PDS5AQ29RF7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PDS5AQ29RF7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PDS5AQ29RF7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
PDS5AQ29RF7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PDS5AQ29RF7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PDS5AQ29RF7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.89■■□□□ 1.1
PDS5AQ29RF7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.89■■□□□ 1.1
PDS5AQ29RF7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
PDS5AQ29RF7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.89■■□□□ 1.1
PDS5AQ29RF7 FDX1P1-201ENST00000449115 551 ntBASIC21.89■■□□□ 1.1
PDS5AQ29RF7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PDS5AQ29RF7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.89■■□□□ 1.1
PDS5AQ29RF7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PDS5AQ29RF7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC21.89■■□□□ 1.1
PDS5AQ29RF7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC21.89■■□□□ 1.1
PDS5AQ29RF7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.89■■□□□ 1.09
PDS5AQ29RF7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDS5AQ29RF7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDS5AQ29RF7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDS5AQ29RF7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.89■■□□□ 1.09
PDS5AQ29RF7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDS5AQ29RF7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDS5AQ29RF7 AC126763.1-201ENST00000552015 2118 ntBASIC21.89■■□□□ 1.09
PDS5AQ29RF7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
PDS5AQ29RF7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDS5AQ29RF7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.89■■□□□ 1.09
PDS5AQ29RF7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDS5AQ29RF7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDS5AQ29RF7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.88■■□□□ 1.09
PDS5AQ29RF7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.88■■□□□ 1.09
PDS5AQ29RF7 NUS1P2-201ENST00000417358 873 ntBASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms