Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
H3F3AP84243 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.41■□□□□ 0.22
H3F3AP84243 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
H3F3AP84243 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.4■□□□□ 0.22
H3F3AP84243 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3AP84243 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3AP84243 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3AP84243 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3AP84243 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3AP84243 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3AP84243 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3AP84243 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.4■□□□□ 0.22
H3F3AP84243 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
H3F3AP84243 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.4■□□□□ 0.22
H3F3AP84243 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.4■□□□□ 0.22
H3F3AP84243 AL162741.1-201ENST00000565563 1558 ntBASIC16.4■□□□□ 0.22
H3F3AP84243 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3AP84243 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3AP84243 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3AP84243 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3AP84243 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3AP84243 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3AP84243 KRT18P38-201ENST00000449496 1282 ntBASIC16.4■□□□□ 0.22
H3F3AP84243 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3AP84243 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.4■□□□□ 0.22
H3F3AP84243 AC022616.7-201ENST00000525383 220 ntBASIC16.4■□□□□ 0.22
H3F3AP84243 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3AP84243 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.4■□□□□ 0.22
H3F3AP84243 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.4■□□□□ 0.22
H3F3AP84243 AC079602.3-201ENST00000623931 403 ntBASIC16.4■□□□□ 0.22
H3F3AP84243 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3AP84243 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3AP84243 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3AP84243 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3AP84243 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.4■□□□□ 0.22
H3F3AP84243 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3AP84243 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
H3F3AP84243 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3AP84243 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3AP84243 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3AP84243 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
H3F3AP84243 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
H3F3AP84243 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
H3F3AP84243 AC099343.3-201ENST00000605834 2503 ntBASIC16.4■□□□□ 0.22
H3F3AP84243 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.4■□□□□ 0.22
H3F3AP84243 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
H3F3AP84243 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.39■□□□□ 0.22
H3F3AP84243 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3AP84243 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3AP84243 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3AP84243 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3AP84243 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3AP84243 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.39■□□□□ 0.21
H3F3AP84243 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3AP84243 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.39■□□□□ 0.21
H3F3AP84243 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3AP84243 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.39■□□□□ 0.21
H3F3AP84243 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.39■□□□□ 0.21
H3F3AP84243 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
H3F3AP84243 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3AP84243 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3AP84243 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
H3F3AP84243 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.39■□□□□ 0.21
H3F3AP84243 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.39■□□□□ 0.21
H3F3AP84243 HLA-F-220ENST00000434407 884 ntBASIC16.39■□□□□ 0.21
H3F3AP84243 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.39■□□□□ 0.21
H3F3AP84243 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.39■□□□□ 0.21
H3F3AP84243 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
H3F3AP84243 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.39■□□□□ 0.21
H3F3AP84243 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3AP84243 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.39■□□□□ 0.21
H3F3AP84243 HYMAI.1-201ENST00000620949 238 ntBASIC16.39■□□□□ 0.21
H3F3AP84243 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
H3F3AP84243 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.39■□□□□ 0.21
H3F3AP84243 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
H3F3AP84243 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3AP84243 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.39■□□□□ 0.21
H3F3AP84243 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3AP84243 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.39■□□□□ 0.21
H3F3AP84243 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
H3F3AP84243 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.39■□□□□ 0.21
H3F3AP84243 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.39■□□□□ 0.21
H3F3AP84243 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.39■□□□□ 0.21
H3F3AP84243 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
H3F3AP84243 GMCL1P1-201ENST00000463439 1581 ntBASIC16.38■□□□□ 0.21
H3F3AP84243 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.38■□□□□ 0.21
H3F3AP84243 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H3F3AP84243 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.38■□□□□ 0.21
H3F3AP84243 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H3F3AP84243 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
H3F3AP84243 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.38■□□□□ 0.21
H3F3AP84243 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
H3F3AP84243 AL024508.2-201ENST00000607749 1894 ntBASIC16.38■□□□□ 0.21
H3F3AP84243 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
H3F3AP84243 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
H3F3AP84243 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
H3F3AP84243 AC092647.4-201ENST00000457211 535 ntBASIC16.38■□□□□ 0.21
H3F3AP84243 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.38■□□□□ 0.21
H3F3AP84243 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.38■□□□□ 0.21
H3F3AP84243 LINC01238-205ENST00000567549 1107 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms