Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC21.2■□□□□ 0.98
HTRA3P83110 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC21.2■□□□□ 0.98
HTRA3P83110 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HTRA3P83110 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.2■□□□□ 0.98
HTRA3P83110 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HTRA3P83110 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HTRA3P83110 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HTRA3P83110 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
HTRA3P83110 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.19■□□□□ 0.98
HTRA3P83110 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.19■□□□□ 0.98
HTRA3P83110 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
HTRA3P83110 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
HTRA3P83110 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HTRA3P83110 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.19■□□□□ 0.98
HTRA3P83110 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
HTRA3P83110 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC21.19■□□□□ 0.98
HTRA3P83110 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
HTRA3P83110 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HTRA3P83110 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC21.19■□□□□ 0.98
HTRA3P83110 SRP19-202ENST00000445150 833 ntTSL 2 BASIC21.19■□□□□ 0.98
HTRA3P83110 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC21.19■□□□□ 0.98
HTRA3P83110 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC21.19■□□□□ 0.98
HTRA3P83110 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC21.19■□□□□ 0.98
HTRA3P83110 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HTRA3P83110 CR383656.12-201ENST00000549567 513 ntBASIC21.19■□□□□ 0.98
HTRA3P83110 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.19■□□□□ 0.98
HTRA3P83110 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC21.19■□□□□ 0.98
HTRA3P83110 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
HTRA3P83110 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.19■□□□□ 0.98
HTRA3P83110 AC006504.4-201ENST00000592118 1568 ntBASIC21.19■□□□□ 0.98
HTRA3P83110 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HTRA3P83110 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.18■□□□□ 0.98
HTRA3P83110 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.18■□□□□ 0.98
HTRA3P83110 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.18■□□□□ 0.98
HTRA3P83110 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HTRA3P83110 DDT-204ENST00000404092 805 ntTSL 3 BASIC21.18■□□□□ 0.98
HTRA3P83110 NME2P1-201ENST00000426182 414 ntBASIC21.18■□□□□ 0.98
HTRA3P83110 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.18■□□□□ 0.98
HTRA3P83110 SMN2-210ENST00000511812 867 ntTSL 2 BASIC21.18■□□□□ 0.98
HTRA3P83110 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
HTRA3P83110 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC21.18■□□□□ 0.98
HTRA3P83110 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC21.18■□□□□ 0.98
HTRA3P83110 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
HTRA3P83110 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HTRA3P83110 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
HTRA3P83110 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HTRA3P83110 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
HTRA3P83110 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HTRA3P83110 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HTRA3P83110 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HTRA3P83110 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HTRA3P83110 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HTRA3P83110 GOLGA6L11P-201ENST00000417252 1298 ntBASIC21.17■□□□□ 0.98
HTRA3P83110 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC21.17■□□□□ 0.98
HTRA3P83110 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC21.17■□□□□ 0.98
HTRA3P83110 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
HTRA3P83110 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
HTRA3P83110 AC010507.1-201ENST00000633895 436 ntBASIC21.17■□□□□ 0.98
HTRA3P83110 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HTRA3P83110 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
HTRA3P83110 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.17■□□□□ 0.98
HTRA3P83110 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HTRA3P83110 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HTRA3P83110 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HTRA3P83110 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HTRA3P83110 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HTRA3P83110 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HTRA3P83110 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
HTRA3P83110 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
HTRA3P83110 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HTRA3P83110 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
HTRA3P83110 LINC01126-201ENST00000623515 1646 ntBASIC21.16■□□□□ 0.98
HTRA3P83110 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.16■□□□□ 0.98
HTRA3P83110 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HTRA3P83110 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HTRA3P83110 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HTRA3P83110 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HTRA3P83110 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC21.16■□□□□ 0.98
HTRA3P83110 CRB3P1-201ENST00000449338 276 ntBASIC21.16■□□□□ 0.98
HTRA3P83110 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC21.16■□□□□ 0.98
HTRA3P83110 PARP8-218ENST00000513738 596 ntTSL 4 BASIC21.16■□□□□ 0.98
HTRA3P83110 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC21.16■□□□□ 0.98
HTRA3P83110 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HTRA3P83110 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC21.16■□□□□ 0.98
HTRA3P83110 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC21.16■□□□□ 0.98
HTRA3P83110 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HTRA3P83110 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
HTRA3P83110 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.16■□□□□ 0.98
HTRA3P83110 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HTRA3P83110 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HTRA3P83110 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HTRA3P83110 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HTRA3P83110 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HTRA3P83110 KRT8P32-201ENST00000512863 1461 ntBASIC21.15■□□□□ 0.98
HTRA3P83110 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HTRA3P83110 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HTRA3P83110 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC21.15■□□□□ 0.98
HTRA3P83110 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HTRA3P83110 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HTRA3P83110 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms