Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.27■□□□□ 0.68
ERVFC1P60507 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ERVFC1P60507 RPS2P28-201ENST00000314255 741 ntBASIC19.27■□□□□ 0.68
ERVFC1P60507 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.27■□□□□ 0.68
ERVFC1P60507 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERVFC1P60507 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.27■□□□□ 0.68
ERVFC1P60507 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.27■□□□□ 0.68
ERVFC1P60507 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.27■□□□□ 0.68
ERVFC1P60507 PGAM5P1-201ENST00000518923 814 ntBASIC19.27■□□□□ 0.68
ERVFC1P60507 IGHV3-22-201ENST00000520721 359 ntBASIC19.27■□□□□ 0.68
ERVFC1P60507 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.27■□□□□ 0.68
ERVFC1P60507 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERVFC1P60507 AC011467.2-201ENST00000598425 242 ntBASIC19.27■□□□□ 0.68
ERVFC1P60507 AC009154.2-201ENST00000621177 724 ntBASIC19.27■□□□□ 0.68
ERVFC1P60507 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERVFC1P60507 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERVFC1P60507 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERVFC1P60507 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ERVFC1P60507 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
ERVFC1P60507 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.27■□□□□ 0.68
ERVFC1P60507 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ERVFC1P60507 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ERVFC1P60507 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ERVFC1P60507 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
ERVFC1P60507 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
ERVFC1P60507 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ERVFC1P60507 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
ERVFC1P60507 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.27■□□□□ 0.67
ERVFC1P60507 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERVFC1P60507 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.26■□□□□ 0.67
ERVFC1P60507 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERVFC1P60507 AC125634.1-201ENST00000438758 1403 ntBASIC19.26■□□□□ 0.67
ERVFC1P60507 AC104109.2-201ENST00000602919 1418 ntBASIC19.26■□□□□ 0.67
ERVFC1P60507 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ERVFC1P60507 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERVFC1P60507 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERVFC1P60507 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.26■□□□□ 0.67
ERVFC1P60507 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERVFC1P60507 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERVFC1P60507 RPS2P1-201ENST00000434010 821 ntBASIC19.26■□□□□ 0.67
ERVFC1P60507 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.26■□□□□ 0.67
ERVFC1P60507 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
ERVFC1P60507 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERVFC1P60507 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.26■□□□□ 0.67
ERVFC1P60507 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERVFC1P60507 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERVFC1P60507 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
ERVFC1P60507 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ERVFC1P60507 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERVFC1P60507 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ERVFC1P60507 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERVFC1P60507 AL049812.1-201ENST00000432563 2267 ntBASIC19.26■□□□□ 0.67
ERVFC1P60507 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERVFC1P60507 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ERVFC1P60507 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ERVFC1P60507 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERVFC1P60507 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.25■□□□□ 0.67
ERVFC1P60507 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERVFC1P60507 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.25■□□□□ 0.67
ERVFC1P60507 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ERVFC1P60507 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
ERVFC1P60507 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ERVFC1P60507 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERVFC1P60507 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ERVFC1P60507 AC005104.2-201ENST00000427818 678 ntBASIC19.25■□□□□ 0.67
ERVFC1P60507 AC145285.3-201ENST00000564603 959 ntBASIC19.25■□□□□ 0.67
ERVFC1P60507 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ERVFC1P60507 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ERVFC1P60507 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.25■□□□□ 0.67
ERVFC1P60507 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.25■□□□□ 0.67
ERVFC1P60507 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ERVFC1P60507 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERVFC1P60507 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERVFC1P60507 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ERVFC1P60507 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERVFC1P60507 AL161938.1-201ENST00000569833 2180 ntBASIC19.25■□□□□ 0.67
ERVFC1P60507 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERVFC1P60507 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.24■□□□□ 0.67
ERVFC1P60507 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERVFC1P60507 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERVFC1P60507 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERVFC1P60507 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERVFC1P60507 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.24■□□□□ 0.67
ERVFC1P60507 MYLKP1-201ENST00000509077 1580 ntBASIC19.24■□□□□ 0.67
ERVFC1P60507 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERVFC1P60507 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.24■□□□□ 0.67
ERVFC1P60507 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
ERVFC1P60507 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ERVFC1P60507 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ERVFC1P60507 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ERVFC1P60507 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERVFC1P60507 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.24■□□□□ 0.67
ERVFC1P60507 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERVFC1P60507 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.24■□□□□ 0.67
ERVFC1P60507 ABCD1P5-201ENST00000445663 754 ntBASIC19.24■□□□□ 0.67
ERVFC1P60507 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.24■□□□□ 0.67
ERVFC1P60507 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.24■□□□□ 0.67
ERVFC1P60507 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ERVFC1P60507 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.24■□□□□ 0.67
ERVFC1P60507 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms