Protein–RNA interactions for Protein: P58499

FAM3B, Protein FAM3B, humanhuman

Predicted RBP Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3BP58499 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
FAM3BP58499 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
FAM3BP58499 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
FAM3BP58499 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FAM3BP58499 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
FAM3BP58499 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.31□□□□□ -0.12
FAM3BP58499 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FAM3BP58499 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FAM3BP58499 PKD1P5-201ENST00000532415 10291 ntBASIC14.31□□□□□ -0.12
FAM3BP58499 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
FAM3BP58499 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FAM3BP58499 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC14.31□□□□□ -0.12
FAM3BP58499 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FAM3BP58499 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FAM3BP58499 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
FAM3BP58499 AC097658.1-201ENST00000475555 843 ntBASIC14.31□□□□□ -0.12
FAM3BP58499 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC14.31□□□□□ -0.12
FAM3BP58499 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FAM3BP58499 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FAM3BP58499 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.31□□□□□ -0.12
FAM3BP58499 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FAM3BP58499 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
FAM3BP58499 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FAM3BP58499 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
FAM3BP58499 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
FAM3BP58499 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FAM3BP58499 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FAM3BP58499 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FAM3BP58499 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
FAM3BP58499 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FAM3BP58499 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FAM3BP58499 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC14.31□□□□□ -0.12
FAM3BP58499 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
FAM3BP58499 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FAM3BP58499 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FAM3BP58499 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
FAM3BP58499 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FAM3BP58499 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
FAM3BP58499 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
FAM3BP58499 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FAM3BP58499 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
FAM3BP58499 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
FAM3BP58499 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FAM3BP58499 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
FAM3BP58499 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FAM3BP58499 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.3□□□□□ -0.12
FAM3BP58499 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FAM3BP58499 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
FAM3BP58499 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FAM3BP58499 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.3□□□□□ -0.12
FAM3BP58499 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
FAM3BP58499 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.3□□□□□ -0.12
FAM3BP58499 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
FAM3BP58499 HLA-G-202ENST00000376815 851 ntBASIC14.3□□□□□ -0.12
FAM3BP58499 HLA-G-203ENST00000376818 1127 ntBASIC14.3□□□□□ -0.12
FAM3BP58499 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC14.3□□□□□ -0.12
FAM3BP58499 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.3□□□□□ -0.12
FAM3BP58499 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.3□□□□□ -0.12
FAM3BP58499 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.3□□□□□ -0.12
FAM3BP58499 AC016405.3-201ENST00000607710 860 ntBASIC14.3□□□□□ -0.12
FAM3BP58499 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC14.3□□□□□ -0.12
FAM3BP58499 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FAM3BP58499 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
FAM3BP58499 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.3□□□□□ -0.12
FAM3BP58499 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.3□□□□□ -0.12
FAM3BP58499 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.3□□□□□ -0.12
FAM3BP58499 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
FAM3BP58499 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
FAM3BP58499 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FAM3BP58499 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.3□□□□□ -0.12
FAM3BP58499 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
FAM3BP58499 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
FAM3BP58499 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FAM3BP58499 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
FAM3BP58499 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.3□□□□□ -0.12
FAM3BP58499 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
FAM3BP58499 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
FAM3BP58499 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
FAM3BP58499 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.3□□□□□ -0.12
FAM3BP58499 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
FAM3BP58499 FEM1AP3-201ENST00000403722 1741 ntBASIC14.29□□□□□ -0.12
FAM3BP58499 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3BP58499 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
FAM3BP58499 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.29□□□□□ -0.12
FAM3BP58499 UBALD1-205ENST00000590891 2641 ntBASIC14.29□□□□□ -0.12
FAM3BP58499 AL596257.1-201ENST00000641463 2694 ntBASIC14.29□□□□□ -0.12
FAM3BP58499 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
FAM3BP58499 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.29□□□□□ -0.12
FAM3BP58499 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3BP58499 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3BP58499 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3BP58499 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3BP58499 PP12613-201ENST00000424958 2230 ntBASIC14.29□□□□□ -0.12
FAM3BP58499 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3BP58499 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.29□□□□□ -0.12
FAM3BP58499 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3BP58499 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3BP58499 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
FAM3BP58499 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3BP58499 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms