Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDH11P55287 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH11P55287 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH11P55287 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH11P55287 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH11P55287 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH11P55287 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH11P55287 AC135776.1-201ENST00000319817 2481 ntBASIC16.84■□□□□ 0.29
CDH11P55287 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH11P55287 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH11P55287 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH11P55287 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.29
CDH11P55287 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH11P55287 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH11P55287 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH11P55287 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH11P55287 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH11P55287 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH11P55287 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH11P55287 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH11P55287 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH11P55287 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH11P55287 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH11P55287 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH11P55287 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH11P55287 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CDH11P55287 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CDH11P55287 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH11P55287 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH11P55287 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH11P55287 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH11P55287 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.83■□□□□ 0.28
CDH11P55287 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH11P55287 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH11P55287 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH11P55287 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH11P55287 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH11P55287 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDH11P55287 ESPNP-201ENST00000270691 2015 ntBASIC16.82■□□□□ 0.28
CDH11P55287 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH11P55287 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH11P55287 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH11P55287 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH11P55287 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH11P55287 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH11P55287 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH11P55287 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CDH11P55287 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.82■□□□□ 0.28
CDH11P55287 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.82■□□□□ 0.28
CDH11P55287 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDH11P55287 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
CDH11P55287 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.82■□□□□ 0.28
CDH11P55287 AL390955.1-201ENST00000428694 934 ntBASIC16.82■□□□□ 0.28
CDH11P55287 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.82■□□□□ 0.28
CDH11P55287 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH11P55287 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH11P55287 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH11P55287 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH11P55287 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.82■□□□□ 0.28
CDH11P55287 AC012306.2-201ENST00000609350 630 ntBASIC16.82■□□□□ 0.28
CDH11P55287 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH11P55287 MIR6786-201ENST00000616843 113 ntBASIC16.82■□□□□ 0.28
CDH11P55287 AC131212.4-201ENST00000623606 975 ntBASIC16.82■□□□□ 0.28
CDH11P55287 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH11P55287 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH11P55287 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
CDH11P55287 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH11P55287 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CDH11P55287 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH11P55287 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH11P55287 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH11P55287 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH11P55287 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH11P55287 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH11P55287 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH11P55287 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
CDH11P55287 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CDH11P55287 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH11P55287 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH11P55287 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH11P55287 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH11P55287 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CDH11P55287 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH11P55287 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
CDH11P55287 KRT8P41-201ENST00000533985 1514 ntBASIC16.81■□□□□ 0.28
CDH11P55287 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH11P55287 FSCN1P1-201ENST00000568912 1481 ntBASIC16.81■□□□□ 0.28
CDH11P55287 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH11P55287 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CDH11P55287 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CDH11P55287 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH11P55287 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH11P55287 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH11P55287 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH11P55287 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH11P55287 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH11P55287 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH11P55287 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
CDH11P55287 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH11P55287 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms