Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.14■□□□□ 0.66
EPHB3P54753 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.14■□□□□ 0.66
EPHB3P54753 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
EPHB3P54753 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
EPHB3P54753 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EPHB3P54753 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.14■□□□□ 0.65
EPHB3P54753 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.14■□□□□ 0.65
EPHB3P54753 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EPHB3P54753 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EPHB3P54753 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EPHB3P54753 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.14■□□□□ 0.65
EPHB3P54753 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EPHB3P54753 NUS1P2-201ENST00000417358 873 ntBASIC19.14■□□□□ 0.65
EPHB3P54753 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
EPHB3P54753 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.14■□□□□ 0.65
EPHB3P54753 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.14■□□□□ 0.65
EPHB3P54753 AC091607.1-201ENST00000490318 1060 ntBASIC19.14■□□□□ 0.65
EPHB3P54753 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EPHB3P54753 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.14■□□□□ 0.65
EPHB3P54753 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.14■□□□□ 0.65
EPHB3P54753 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
EPHB3P54753 AL353801.3-201ENST00000609898 542 ntBASIC19.14■□□□□ 0.65
EPHB3P54753 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.14■□□□□ 0.65
EPHB3P54753 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.14■□□□□ 0.65
EPHB3P54753 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.14■□□□□ 0.65
EPHB3P54753 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.14■□□□□ 0.65
EPHB3P54753 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
EPHB3P54753 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.14■□□□□ 0.65
EPHB3P54753 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EPHB3P54753 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EPHB3P54753 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.14■□□□□ 0.65
EPHB3P54753 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
EPHB3P54753 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EPHB3P54753 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EPHB3P54753 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EPHB3P54753 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
EPHB3P54753 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
EPHB3P54753 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EPHB3P54753 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EPHB3P54753 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
EPHB3P54753 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
EPHB3P54753 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.13■□□□□ 0.65
EPHB3P54753 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.13■□□□□ 0.65
EPHB3P54753 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.13■□□□□ 0.65
EPHB3P54753 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.13■□□□□ 0.65
EPHB3P54753 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.13■□□□□ 0.65
EPHB3P54753 AL031008.1-201ENST00000619963 541 ntBASIC19.13■□□□□ 0.65
EPHB3P54753 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.13■□□□□ 0.65
EPHB3P54753 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EPHB3P54753 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EPHB3P54753 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EPHB3P54753 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EPHB3P54753 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EPHB3P54753 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
EPHB3P54753 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
EPHB3P54753 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
EPHB3P54753 AL024508.2-201ENST00000607749 1894 ntBASIC19.13■□□□□ 0.65
EPHB3P54753 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
EPHB3P54753 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.12■□□□□ 0.65
EPHB3P54753 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
EPHB3P54753 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
EPHB3P54753 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
EPHB3P54753 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
EPHB3P54753 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
EPHB3P54753 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
EPHB3P54753 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
EPHB3P54753 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
EPHB3P54753 POM121L3P-201ENST00000419331 1163 ntBASIC19.12■□□□□ 0.65
EPHB3P54753 AL160237.2-201ENST00000556165 472 ntBASIC19.12■□□□□ 0.65
EPHB3P54753 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
EPHB3P54753 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.12■□□□□ 0.65
EPHB3P54753 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
EPHB3P54753 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
EPHB3P54753 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
EPHB3P54753 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
EPHB3P54753 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
EPHB3P54753 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
EPHB3P54753 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
EPHB3P54753 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
EPHB3P54753 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
EPHB3P54753 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
EPHB3P54753 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
EPHB3P54753 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.11■□□□□ 0.65
EPHB3P54753 AL499627.1-201ENST00000569373 2188 ntBASIC19.11■□□□□ 0.65
EPHB3P54753 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
EPHB3P54753 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
EPHB3P54753 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
EPHB3P54753 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.11■□□□□ 0.65
EPHB3P54753 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.11■□□□□ 0.65
EPHB3P54753 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
EPHB3P54753 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.11■□□□□ 0.65
EPHB3P54753 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
EPHB3P54753 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
EPHB3P54753 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.11■□□□□ 0.65
EPHB3P54753 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.11■□□□□ 0.65
EPHB3P54753 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
EPHB3P54753 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
EPHB3P54753 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
EPHB3P54753 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
EPHB3P54753 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms