Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.43■□□□□ 0.7
CACNA2D1P54289 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.43■□□□□ 0.7
CACNA2D1P54289 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA2D1P54289 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.43■□□□□ 0.7
CACNA2D1P54289 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA2D1P54289 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA2D1P54289 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA2D1P54289 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA2D1P54289 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA2D1P54289 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CACNA2D1P54289 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA2D1P54289 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA2D1P54289 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA2D1P54289 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CACNA2D1P54289 SDHAP2-201ENST00000455183 2001 ntBASIC19.42■□□□□ 0.7
CACNA2D1P54289 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.42■□□□□ 0.7
CACNA2D1P54289 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.42■□□□□ 0.7
CACNA2D1P54289 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA2D1P54289 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA2D1P54289 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CACNA2D1P54289 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA2D1P54289 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.42■□□□□ 0.7
CACNA2D1P54289 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA2D1P54289 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA2D1P54289 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.42■□□□□ 0.7
CACNA2D1P54289 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.42■□□□□ 0.7
CACNA2D1P54289 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.42■□□□□ 0.7
CACNA2D1P54289 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.42■□□□□ 0.7
CACNA2D1P54289 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.42■□□□□ 0.7
CACNA2D1P54289 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.42■□□□□ 0.7
CACNA2D1P54289 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.42■□□□□ 0.7
CACNA2D1P54289 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA2D1P54289 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CACNA2D1P54289 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.42■□□□□ 0.7
CACNA2D1P54289 AC093458.2-201ENST00000623150 629 ntBASIC19.42■□□□□ 0.7
CACNA2D1P54289 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA2D1P54289 AC093503.3-201ENST00000624917 2352 ntBASIC19.42■□□□□ 0.7
CACNA2D1P54289 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA2D1P54289 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CACNA2D1P54289 AC126763.1-201ENST00000552015 2118 ntBASIC19.42■□□□□ 0.7
CACNA2D1P54289 AC112777.1-201ENST00000540175 1423 ntBASIC19.42■□□□□ 0.7
CACNA2D1P54289 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA2D1P54289 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA2D1P54289 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA2D1P54289 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.41■□□□□ 0.7
CACNA2D1P54289 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA2D1P54289 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA2D1P54289 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA2D1P54289 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CACNA2D1P54289 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CACNA2D1P54289 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CACNA2D1P54289 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
CACNA2D1P54289 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CACNA2D1P54289 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA2D1P54289 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.41■□□□□ 0.7
CACNA2D1P54289 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.41■□□□□ 0.7
CACNA2D1P54289 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.41■□□□□ 0.7
CACNA2D1P54289 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.41■□□□□ 0.7
CACNA2D1P54289 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.41■□□□□ 0.7
CACNA2D1P54289 AC011498.5-201ENST00000592027 486 ntBASIC19.41■□□□□ 0.7
CACNA2D1P54289 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.41■□□□□ 0.7
CACNA2D1P54289 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA2D1P54289 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA2D1P54289 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA2D1P54289 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CACNA2D1P54289 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA2D1P54289 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA2D1P54289 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA2D1P54289 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA2D1P54289 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
CACNA2D1P54289 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CACNA2D1P54289 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA2D1P54289 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA2D1P54289 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CACNA2D1P54289 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.4■□□□□ 0.7
CACNA2D1P54289 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA2D1P54289 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.4■□□□□ 0.7
CACNA2D1P54289 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CACNA2D1P54289 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA2D1P54289 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.4■□□□□ 0.7
CACNA2D1P54289 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA2D1P54289 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CACNA2D1P54289 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA2D1P54289 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA2D1P54289 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA2D1P54289 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA2D1P54289 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CACNA2D1P54289 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA2D1P54289 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CACNA2D1P54289 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CACNA2D1P54289 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.39■□□□□ 0.69
CACNA2D1P54289 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNA2D1P54289 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNA2D1P54289 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNA2D1P54289 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.39■□□□□ 0.69
CACNA2D1P54289 MIR149-201ENST00000384879 89 ntBASIC19.39■□□□□ 0.69
CACNA2D1P54289 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.39■□□□□ 0.69
CACNA2D1P54289 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CACNA2D1P54289 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CACNA2D1P54289 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms