Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.16■□□□□ 0.34
EFNA3P52797 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNA3P52797 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
EFNA3P52797 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNA3P52797 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
EFNA3P52797 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
EFNA3P52797 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
EFNA3P52797 BX323043.1-201ENST00000641006 1765 ntBASIC17.15■□□□□ 0.34
EFNA3P52797 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.15■□□□□ 0.34
EFNA3P52797 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.15■□□□□ 0.34
EFNA3P52797 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
EFNA3P52797 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EFNA3P52797 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNA3P52797 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EFNA3P52797 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNA3P52797 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNA3P52797 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
EFNA3P52797 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.15■□□□□ 0.34
EFNA3P52797 HCG4P8-203ENST00000443049 980 ntBASIC17.15■□□□□ 0.34
EFNA3P52797 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.15■□□□□ 0.34
EFNA3P52797 KRT18P56-201ENST00000507275 550 ntBASIC17.15■□□□□ 0.34
EFNA3P52797 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.15■□□□□ 0.34
EFNA3P52797 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
EFNA3P52797 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.15■□□□□ 0.34
EFNA3P52797 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.15■□□□□ 0.34
EFNA3P52797 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.15■□□□□ 0.34
EFNA3P52797 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.15■□□□□ 0.34
EFNA3P52797 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
EFNA3P52797 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EFNA3P52797 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EFNA3P52797 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.15■□□□□ 0.34
EFNA3P52797 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNA3P52797 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNA3P52797 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.15■□□□□ 0.34
EFNA3P52797 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EFNA3P52797 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EFNA3P52797 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EFNA3P52797 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EFNA3P52797 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNA3P52797 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNA3P52797 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EFNA3P52797 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNA3P52797 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
EFNA3P52797 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNA3P52797 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EFNA3P52797 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
EFNA3P52797 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
EFNA3P52797 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFNA3P52797 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.14■□□□□ 0.33
EFNA3P52797 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.14■□□□□ 0.33
EFNA3P52797 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFNA3P52797 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.14■□□□□ 0.33
EFNA3P52797 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFNA3P52797 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
EFNA3P52797 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.14■□□□□ 0.33
EFNA3P52797 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFNA3P52797 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.14■□□□□ 0.33
EFNA3P52797 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.14■□□□□ 0.33
EFNA3P52797 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EFNA3P52797 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.14■□□□□ 0.33
EFNA3P52797 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EFNA3P52797 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
EFNA3P52797 BX276092.5-203ENST00000456199 560 ntBASIC17.14■□□□□ 0.33
EFNA3P52797 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.14■□□□□ 0.33
EFNA3P52797 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.14■□□□□ 0.33
EFNA3P52797 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
EFNA3P52797 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.14■□□□□ 0.33
EFNA3P52797 AL121672.3-201ENST00000608644 468 ntBASIC17.14■□□□□ 0.33
EFNA3P52797 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFNA3P52797 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.14■□□□□ 0.33
EFNA3P52797 AC012313.10-201ENST00000623509 926 ntBASIC17.14■□□□□ 0.33
EFNA3P52797 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFNA3P52797 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
EFNA3P52797 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.14■□□□□ 0.33
EFNA3P52797 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
EFNA3P52797 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.14■□□□□ 0.33
EFNA3P52797 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.14■□□□□ 0.33
EFNA3P52797 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EFNA3P52797 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.14■□□□□ 0.33
EFNA3P52797 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFNA3P52797 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFNA3P52797 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.13■□□□□ 0.33
EFNA3P52797 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.13■□□□□ 0.33
EFNA3P52797 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.13■□□□□ 0.33
EFNA3P52797 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EFNA3P52797 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFNA3P52797 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.13■□□□□ 0.33
EFNA3P52797 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFNA3P52797 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
EFNA3P52797 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFNA3P52797 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFNA3P52797 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
EFNA3P52797 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.13■□□□□ 0.33
EFNA3P52797 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
EFNA3P52797 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EFNA3P52797 KRT18P48-201ENST00000434763 852 ntBASIC17.13■□□□□ 0.33
EFNA3P52797 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EFNA3P52797 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.13■□□□□ 0.33
EFNA3P52797 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.13■□□□□ 0.33
EFNA3P52797 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms