Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC34P49427 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC34P49427 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDC34P49427 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC34P49427 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDC34P49427 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC34P49427 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC34P49427 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.51□□□□□ -0.09
CDC34P49427 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CDC34P49427 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDC34P49427 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC34P49427 TNRC18P3-201ENST00000441896 2691 ntBASIC14.5□□□□□ -0.09
CDC34P49427 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC34P49427 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.5□□□□□ -0.09
CDC34P49427 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC34P49427 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC34P49427 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC34P49427 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDC34P49427 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDC34P49427 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC34P49427 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC34P49427 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC34P49427 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CDC34P49427 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC34P49427 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.5□□□□□ -0.09
CDC34P49427 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC34P49427 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CDC34P49427 GXYLT1P2-201ENST00000433312 1230 ntBASIC14.5□□□□□ -0.09
CDC34P49427 LGR4-203ENST00000480977 492 ntTSL 2 BASIC14.5□□□□□ -0.09
CDC34P49427 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC14.5□□□□□ -0.09
CDC34P49427 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC14.5□□□□□ -0.09
CDC34P49427 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC14.5□□□□□ -0.09
CDC34P49427 MAZ-216ENST00000616501 991 ntTSL 5 BASIC14.5□□□□□ -0.09
CDC34P49427 MDK-213ENST00000617138 635 ntTSL 2 BASIC14.5□□□□□ -0.09
CDC34P49427 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC34P49427 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.5□□□□□ -0.09
CDC34P49427 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDC34P49427 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC34P49427 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.5□□□□□ -0.09
CDC34P49427 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.5□□□□□ -0.09
CDC34P49427 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC34P49427 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDC34P49427 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CDC34P49427 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.5□□□□□ -0.09
CDC34P49427 AL357033.4-201ENST00000617703 1807 ntBASIC14.5□□□□□ -0.09
CDC34P49427 KRT8P32-201ENST00000512863 1461 ntBASIC14.5□□□□□ -0.09
CDC34P49427 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC34P49427 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.5□□□□□ -0.09
CDC34P49427 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC34P49427 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CDC34P49427 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC34P49427 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC34P49427 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CDC34P49427 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC34P49427 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC34P49427 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC14.49□□□□□ -0.09
CDC34P49427 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC34P49427 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC34P49427 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC34P49427 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.49□□□□□ -0.09
CDC34P49427 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.49□□□□□ -0.09
CDC34P49427 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.49□□□□□ -0.09
CDC34P49427 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDC34P49427 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CDC34P49427 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC34P49427 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC34P49427 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC34P49427 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC34P49427 TREX2-204ENST00000370212 861 ntTSL 5 BASIC14.49□□□□□ -0.09
CDC34P49427 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CDC34P49427 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.49□□□□□ -0.09
CDC34P49427 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CDC34P49427 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC14.49□□□□□ -0.09
CDC34P49427 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC14.49□□□□□ -0.09
CDC34P49427 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC34P49427 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.49□□□□□ -0.09
CDC34P49427 PLD4-205ENST00000553861 667 ntTSL 2 BASIC14.49□□□□□ -0.09
CDC34P49427 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.49□□□□□ -0.09
CDC34P49427 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC14.49□□□□□ -0.09
CDC34P49427 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC14.49□□□□□ -0.09
CDC34P49427 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC34P49427 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.49□□□□□ -0.09
CDC34P49427 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDC34P49427 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC34P49427 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.49□□□□□ -0.09
CDC34P49427 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC34P49427 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CDC34P49427 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CDC34P49427 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC34P49427 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDC34P49427 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CDC34P49427 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.49□□□□□ -0.09
CDC34P49427 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC34P49427 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CDC34P49427 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC34P49427 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.48□□□□□ -0.09
CDC34P49427 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC34P49427 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.48□□□□□ -0.09
CDC34P49427 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDC34P49427 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms