Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A1P43005 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC1A1P43005 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A1P43005 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A1P43005 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SLC1A1P43005 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A1P43005 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A1P43005 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC1A1P43005 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.22■□□□□ 0.67
SLC1A1P43005 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC1A1P43005 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC1A1P43005 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A1P43005 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SLC1A1P43005 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A1P43005 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A1P43005 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
SLC1A1P43005 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
SLC1A1P43005 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC1A1P43005 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC1A1P43005 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A1P43005 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC1A1P43005 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SLC1A1P43005 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A1P43005 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A1P43005 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A1P43005 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A1P43005 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A1P43005 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
SLC1A1P43005 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SLC1A1P43005 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC1A1P43005 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A1P43005 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A1P43005 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A1P43005 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A1P43005 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A1P43005 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A1P43005 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC1A1P43005 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A1P43005 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A1P43005 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
SLC1A1P43005 AC104390.1-201ENST00000555663 520 ntBASIC19.21■□□□□ 0.67
SLC1A1P43005 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A1P43005 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.21■□□□□ 0.67
SLC1A1P43005 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SLC1A1P43005 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.21■□□□□ 0.67
SLC1A1P43005 AP000525.1-201ENST00000608286 694 ntBASIC19.21■□□□□ 0.67
SLC1A1P43005 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A1P43005 AC010653.2-201ENST00000623505 997 ntBASIC19.21■□□□□ 0.67
SLC1A1P43005 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC1A1P43005 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A1P43005 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A1P43005 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC1A1P43005 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A1P43005 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A1P43005 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A1P43005 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
SLC1A1P43005 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC1A1P43005 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
SLC1A1P43005 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A1P43005 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A1P43005 AC134043.2-201ENST00000624206 2238 ntBASIC19.2■□□□□ 0.66
SLC1A1P43005 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A1P43005 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SLC1A1P43005 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A1P43005 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A1P43005 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A1P43005 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A1P43005 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A1P43005 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A1P43005 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A1P43005 TSPY7P-201ENST00000431358 1114 ntBASIC19.2■□□□□ 0.66
SLC1A1P43005 AC007663.1-201ENST00000438948 1240 ntBASIC19.2■□□□□ 0.66
SLC1A1P43005 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A1P43005 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.2■□□□□ 0.66
SLC1A1P43005 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.2■□□□□ 0.66
SLC1A1P43005 C2orf69P3-201ENST00000565542 1120 ntBASIC19.2■□□□□ 0.66
SLC1A1P43005 AC112497.1-201ENST00000624824 639 ntBASIC19.2■□□□□ 0.66
SLC1A1P43005 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A1P43005 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A1P43005 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SLC1A1P43005 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SLC1A1P43005 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A1P43005 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC1A1P43005 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A1P43005 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SLC1A1P43005 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC1A1P43005 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A1P43005 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC1A1P43005 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC1A1P43005 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A1P43005 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A1P43005 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A1P43005 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC1A1P43005 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A1P43005 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A1P43005 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A1P43005 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A1P43005 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A1P43005 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A1P43005 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms