Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
HTTP42858 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.55■□□□□ 0.88
HTTP42858 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTTP42858 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HTTP42858 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HTTP42858 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HTTP42858 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HTTP42858 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTTP42858 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTTP42858 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
HTTP42858 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTTP42858 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTTP42858 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTTP42858 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.55■□□□□ 0.88
HTTP42858 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HTTP42858 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTTP42858 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTTP42858 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTTP42858 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
HTTP42858 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTTP42858 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HTTP42858 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC20.55■□□□□ 0.88
HTTP42858 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTTP42858 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HTTP42858 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
HTTP42858 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.54■□□□□ 0.88
HTTP42858 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
HTTP42858 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
HTTP42858 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTTP42858 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
HTTP42858 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HTTP42858 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
HTTP42858 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.54■□□□□ 0.88
HTTP42858 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTTP42858 AC093512.1-201ENST00000617969 520 ntBASIC20.54■□□□□ 0.88
HTTP42858 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.54■□□□□ 0.88
HTTP42858 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.54■□□□□ 0.88
HTTP42858 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.54■□□□□ 0.88
HTTP42858 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
HTTP42858 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTTP42858 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HTTP42858 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.54■□□□□ 0.88
HTTP42858 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTTP42858 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTTP42858 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HTTP42858 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.53■□□□□ 0.88
HTTP42858 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.53■□□□□ 0.88
HTTP42858 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTTP42858 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTTP42858 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.53■□□□□ 0.88
HTTP42858 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTTP42858 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTTP42858 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC20.53■□□□□ 0.88
HTTP42858 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC20.53■□□□□ 0.88
HTTP42858 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.53■□□□□ 0.88
HTTP42858 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
HTTP42858 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
HTTP42858 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTTP42858 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTTP42858 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTTP42858 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTTP42858 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTTP42858 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.53■□□□□ 0.88
HTTP42858 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
HTTP42858 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
HTTP42858 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTTP42858 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC20.53■□□□□ 0.88
HTTP42858 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC20.53■□□□□ 0.88
HTTP42858 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTTP42858 PDPK2P-202ENST00000562415 1191 ntBASIC20.53■□□□□ 0.88
HTTP42858 AL031432.2-201ENST00000566714 459 ntBASIC20.53■□□□□ 0.88
HTTP42858 AL928711.1-201ENST00000570165 459 ntBASIC20.53■□□□□ 0.88
HTTP42858 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.53■□□□□ 0.88
HTTP42858 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
HTTP42858 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
HTTP42858 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.52■□□□□ 0.88
HTTP42858 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.52■□□□□ 0.88
HTTP42858 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.52■□□□□ 0.88
HTTP42858 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.52■□□□□ 0.88
HTTP42858 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.52■□□□□ 0.88
HTTP42858 AL513190.1-201ENST00000621254 727 ntBASIC20.52■□□□□ 0.88
HTTP42858 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HTTP42858 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.52■□□□□ 0.88
HTTP42858 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.52■□□□□ 0.88
HTTP42858 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HTTP42858 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HTTP42858 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HTTP42858 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HTTP42858 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
HTTP42858 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.52■□□□□ 0.88
HTTP42858 AC068472.1-201ENST00000474589 881 ntBASIC20.52■□□□□ 0.88
HTTP42858 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.52■□□□□ 0.88
HTTP42858 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.52■□□□□ 0.88
HTTP42858 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
HTTP42858 AP000867.4-201ENST00000641616 219 ntBASIC20.52■□□□□ 0.88
HTTP42858 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
HTTP42858 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
HTTP42858 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.52■□□□□ 0.87
HTTP42858 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
HTTP42858 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms