Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL5P42830 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CXCL5P42830 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL5P42830 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC12.39□□□□□ -0.43
CXCL5P42830 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL5P42830 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL5P42830 AC084018.2-201ENST00000613093 2607 ntBASIC12.39□□□□□ -0.43
CXCL5P42830 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL5P42830 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC12.39□□□□□ -0.43
CXCL5P42830 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL5P42830 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
CXCL5P42830 PARL-206ENST00000435888 1098 ntTSL 5 BASIC12.39□□□□□ -0.43
CXCL5P42830 TSPY6P-201ENST00000448518 926 ntBASIC12.39□□□□□ -0.43
CXCL5P42830 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC12.39□□□□□ -0.43
CXCL5P42830 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC12.39□□□□□ -0.43
CXCL5P42830 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL5P42830 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL5P42830 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CXCL5P42830 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC12.39□□□□□ -0.43
CXCL5P42830 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC12.39□□□□□ -0.43
CXCL5P42830 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL5P42830 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL5P42830 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC12.39□□□□□ -0.43
CXCL5P42830 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL5P42830 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL5P42830 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
CXCL5P42830 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL5P42830 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC12.39□□□□□ -0.43
CXCL5P42830 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL5P42830 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC12.39□□□□□ -0.43
CXCL5P42830 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CXCL5P42830 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
CXCL5P42830 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL5P42830 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL5P42830 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL5P42830 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CXCL5P42830 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL5P42830 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL5P42830 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC12.39□□□□□ -0.43
CXCL5P42830 OVCH1-AS1-204ENST00000641955 5529 ntBASIC12.39□□□□□ -0.43
CXCL5P42830 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL5P42830 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CXCL5P42830 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL5P42830 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC12.38□□□□□ -0.43
CXCL5P42830 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL5P42830 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL5P42830 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL5P42830 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC12.38□□□□□ -0.43
CXCL5P42830 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL5P42830 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL5P42830 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC12.38□□□□□ -0.43
CXCL5P42830 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CXCL5P42830 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC12.38□□□□□ -0.43
CXCL5P42830 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL5P42830 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL5P42830 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC12.38□□□□□ -0.43
CXCL5P42830 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL5P42830 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC12.38□□□□□ -0.43
CXCL5P42830 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL5P42830 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL5P42830 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL5P42830 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC12.38□□□□□ -0.43
CXCL5P42830 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC12.38□□□□□ -0.43
CXCL5P42830 POU5F1P3-201ENST00000428824 1078 ntBASIC12.38□□□□□ -0.43
CXCL5P42830 PTPA-216ENST00000432651 857 ntTSL 2 BASIC12.38□□□□□ -0.43
CXCL5P42830 GLI3-203ENST00000437480 451 ntTSL 2 BASIC12.38□□□□□ -0.43
CXCL5P42830 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC12.38□□□□□ -0.43
CXCL5P42830 UNC93B4-201ENST00000505679 747 ntBASIC12.38□□□□□ -0.43
CXCL5P42830 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC12.38□□□□□ -0.43
CXCL5P42830 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
CXCL5P42830 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC12.38□□□□□ -0.43
CXCL5P42830 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL5P42830 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC12.38□□□□□ -0.43
CXCL5P42830 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL5P42830 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL5P42830 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC12.38□□□□□ -0.43
CXCL5P42830 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL5P42830 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL5P42830 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL5P42830 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL5P42830 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC12.38□□□□□ -0.43
CXCL5P42830 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL5P42830 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL5P42830 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CXCL5P42830 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.38□□□□□ -0.43
CXCL5P42830 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL5P42830 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL5P42830 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL5P42830 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL5P42830 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL5P42830 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC12.37□□□□□ -0.43
CXCL5P42830 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL5P42830 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL5P42830 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL5P42830 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL5P42830 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL5P42830 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL5P42830 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC12.37□□□□□ -0.43
CXCL5P42830 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL5P42830 AC138028.4-201ENST00000564984 1845 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms