Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.83■□□□□ 0.76
TNFSF9P41273 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF9P41273 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TNFSF9P41273 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF9P41273 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF9P41273 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.82■□□□□ 0.76
TNFSF9P41273 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF9P41273 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF9P41273 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF9P41273 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF9P41273 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF9P41273 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TNFSF9P41273 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.82■□□□□ 0.76
TNFSF9P41273 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.82■□□□□ 0.76
TNFSF9P41273 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.82■□□□□ 0.76
TNFSF9P41273 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.82■□□□□ 0.76
TNFSF9P41273 GPR32P1-201ENST00000601788 811 ntBASIC19.82■□□□□ 0.76
TNFSF9P41273 AC069148.1-201ENST00000608741 768 ntBASIC19.82■□□□□ 0.76
TNFSF9P41273 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TNFSF9P41273 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF9P41273 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF9P41273 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF9P41273 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF9P41273 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.82■□□□□ 0.76
TNFSF9P41273 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TNFSF9P41273 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TNFSF9P41273 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF9P41273 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF9P41273 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF9P41273 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.81■□□□□ 0.76
TNFSF9P41273 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TNFSF9P41273 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF9P41273 KRT89P-201ENST00000620027 1478 ntBASIC19.81■□□□□ 0.76
TNFSF9P41273 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.81■□□□□ 0.76
TNFSF9P41273 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TNFSF9P41273 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF9P41273 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF9P41273 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF9P41273 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF9P41273 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.81■□□□□ 0.76
TNFSF9P41273 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.81■□□□□ 0.76
TNFSF9P41273 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF9P41273 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
TNFSF9P41273 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.81■□□□□ 0.76
TNFSF9P41273 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF9P41273 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF9P41273 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.81■□□□□ 0.76
TNFSF9P41273 AC004263.2-201ENST00000617183 678 ntBASIC19.81■□□□□ 0.76
TNFSF9P41273 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.81■□□□□ 0.76
TNFSF9P41273 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF9P41273 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF9P41273 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF9P41273 GMCL1P1-201ENST00000463439 1581 ntBASIC19.81■□□□□ 0.76
TNFSF9P41273 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF9P41273 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF9P41273 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF9P41273 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TNFSF9P41273 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TNFSF9P41273 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF9P41273 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.8■□□□□ 0.76
TNFSF9P41273 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF9P41273 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF9P41273 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF9P41273 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF9P41273 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TNFSF9P41273 BX276092.5-203ENST00000456199 560 ntBASIC19.8■□□□□ 0.76
TNFSF9P41273 KRT8P26-201ENST00000534154 1276 ntBASIC19.8■□□□□ 0.76
TNFSF9P41273 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.8■□□□□ 0.76
TNFSF9P41273 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.8■□□□□ 0.76
TNFSF9P41273 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.8■□□□□ 0.76
TNFSF9P41273 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TNFSF9P41273 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.8■□□□□ 0.76
TNFSF9P41273 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF9P41273 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF9P41273 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TNFSF9P41273 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.8■□□□□ 0.76
TNFSF9P41273 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF9P41273 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TNFSF9P41273 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF9P41273 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.8■□□□□ 0.76
TNFSF9P41273 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF9P41273 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF9P41273 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.79■□□□□ 0.76
TNFSF9P41273 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF9P41273 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF9P41273 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF9P41273 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF9P41273 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TNFSF9P41273 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.79■□□□□ 0.76
TNFSF9P41273 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.79■□□□□ 0.76
TNFSF9P41273 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.79■□□□□ 0.76
TNFSF9P41273 AL121672.3-201ENST00000608644 468 ntBASIC19.79■□□□□ 0.76
TNFSF9P41273 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF9P41273 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF9P41273 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF9P41273 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
TNFSF9P41273 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF9P41273 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.79■□□□□ 0.76
TNFSF9P41273 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF9P41273 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms