Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFC5P40937 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RFC5P40937 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.2■□□□□ 0.82
RFC5P40937 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFC5P40937 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFC5P40937 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RFC5P40937 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RFC5P40937 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.2■□□□□ 0.82
RFC5P40937 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFC5P40937 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFC5P40937 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFC5P40937 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.2■□□□□ 0.82
RFC5P40937 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RFC5P40937 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.2■□□□□ 0.82
RFC5P40937 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RFC5P40937 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.2■□□□□ 0.82
RFC5P40937 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
RFC5P40937 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.2■□□□□ 0.82
RFC5P40937 AP002414.4-201ENST00000589764 1148 ntBASIC20.2■□□□□ 0.82
RFC5P40937 AC092329.2-201ENST00000598402 547 ntBASIC20.2■□□□□ 0.82
RFC5P40937 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RFC5P40937 KRT18P1-202ENST00000452408 1331 ntBASIC20.2■□□□□ 0.82
RFC5P40937 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFC5P40937 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.2■□□□□ 0.82
RFC5P40937 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFC5P40937 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFC5P40937 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RFC5P40937 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RFC5P40937 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RFC5P40937 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFC5P40937 AC005082.1-201ENST00000413042 2259 ntBASIC20.19■□□□□ 0.82
RFC5P40937 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFC5P40937 AC098818.2-201ENST00000564925 2320 ntBASIC20.19■□□□□ 0.82
RFC5P40937 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFC5P40937 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFC5P40937 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFC5P40937 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RFC5P40937 GUSBP12-201ENST00000513727 720 ntBASIC20.19■□□□□ 0.82
RFC5P40937 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.19■□□□□ 0.82
RFC5P40937 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.19■□□□□ 0.82
RFC5P40937 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.19■□□□□ 0.82
RFC5P40937 GMCL1P1-201ENST00000463439 1581 ntBASIC20.19■□□□□ 0.82
RFC5P40937 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RFC5P40937 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFC5P40937 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RFC5P40937 LINC01126-201ENST00000623515 1646 ntBASIC20.19■□□□□ 0.82
RFC5P40937 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFC5P40937 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFC5P40937 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFC5P40937 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RFC5P40937 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFC5P40937 TNXA-203ENST00000507684 2038 ntBASIC20.19■□□□□ 0.82
RFC5P40937 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFC5P40937 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.18■□□□□ 0.82
RFC5P40937 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
RFC5P40937 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
RFC5P40937 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RFC5P40937 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RFC5P40937 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFC5P40937 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFC5P40937 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFC5P40937 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RFC5P40937 DRAXINP1-201ENST00000437611 948 ntBASIC20.18■□□□□ 0.82
RFC5P40937 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.18■□□□□ 0.82
RFC5P40937 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RFC5P40937 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RFC5P40937 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.18■□□□□ 0.82
RFC5P40937 IGHV3-41-201ENST00000613121 348 ntBASIC20.18■□□□□ 0.82
RFC5P40937 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RFC5P40937 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RFC5P40937 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.18■□□□□ 0.82
RFC5P40937 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFC5P40937 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RFC5P40937 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RFC5P40937 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.18■□□□□ 0.82
RFC5P40937 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.18■□□□□ 0.82
RFC5P40937 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RFC5P40937 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RFC5P40937 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC5P40937 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.17■□□□□ 0.82
RFC5P40937 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC5P40937 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC5P40937 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RFC5P40937 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RFC5P40937 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.17■□□□□ 0.82
RFC5P40937 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC5P40937 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
RFC5P40937 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC5P40937 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC5P40937 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RFC5P40937 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.17■□□□□ 0.82
RFC5P40937 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC5P40937 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RFC5P40937 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC5P40937 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RFC5P40937 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC5P40937 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.17■□□□□ 0.82
RFC5P40937 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
RFC5P40937 TPSP2-201ENST00000561760 610 ntBASIC20.17■□□□□ 0.82
RFC5P40937 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms