Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT20P35900 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KRT20P35900 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT20P35900 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT20P35900 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.48■□□□□ 0.39
KRT20P35900 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT20P35900 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
KRT20P35900 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT20P35900 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT20P35900 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.48■□□□□ 0.39
KRT20P35900 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.48■□□□□ 0.39
KRT20P35900 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT20P35900 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KRT20P35900 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT20P35900 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT20P35900 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT20P35900 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.47■□□□□ 0.39
KRT20P35900 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT20P35900 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.47■□□□□ 0.39
KRT20P35900 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
KRT20P35900 ABALON-201ENST00000629058 1903 ntBASIC17.47■□□□□ 0.39
KRT20P35900 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT20P35900 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.47■□□□□ 0.39
KRT20P35900 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.47■□□□□ 0.39
KRT20P35900 CCR12P-201ENST00000446203 998 ntBASIC17.47■□□□□ 0.39
KRT20P35900 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KRT20P35900 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.47■□□□□ 0.39
KRT20P35900 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT20P35900 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.47■□□□□ 0.39
KRT20P35900 NAPSB-206ENST00000562112 1266 ntBASIC17.47■□□□□ 0.39
KRT20P35900 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
KRT20P35900 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.47■□□□□ 0.39
KRT20P35900 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT20P35900 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.47■□□□□ 0.39
KRT20P35900 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.47■□□□□ 0.39
KRT20P35900 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT20P35900 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.47■□□□□ 0.39
KRT20P35900 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.47■□□□□ 0.39
KRT20P35900 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT20P35900 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT20P35900 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT20P35900 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT20P35900 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT20P35900 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KRT20P35900 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT20P35900 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
KRT20P35900 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT20P35900 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT20P35900 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
KRT20P35900 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT20P35900 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KRT20P35900 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.46■□□□□ 0.39
KRT20P35900 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
KRT20P35900 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.46■□□□□ 0.39
KRT20P35900 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.46■□□□□ 0.39
KRT20P35900 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.46■□□□□ 0.39
KRT20P35900 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.46■□□□□ 0.39
KRT20P35900 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.46■□□□□ 0.39
KRT20P35900 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
KRT20P35900 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.46■□□□□ 0.39
KRT20P35900 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
KRT20P35900 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT20P35900 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT20P35900 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT20P35900 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
KRT20P35900 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
KRT20P35900 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT20P35900 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KRT20P35900 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.46■□□□□ 0.39
KRT20P35900 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KRT20P35900 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
KRT20P35900 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT20P35900 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
KRT20P35900 ANO7L1-203ENST00000602586 1720 ntBASIC17.45■□□□□ 0.38
KRT20P35900 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
KRT20P35900 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
KRT20P35900 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT20P35900 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT20P35900 SLC25A1P2-201ENST00000430693 912 ntBASIC17.45■□□□□ 0.38
KRT20P35900 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT20P35900 BX088651.1-201ENST00000540551 451 ntBASIC17.45■□□□□ 0.38
KRT20P35900 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.45■□□□□ 0.38
KRT20P35900 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.45■□□□□ 0.38
KRT20P35900 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT20P35900 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT20P35900 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT20P35900 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT20P35900 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
KRT20P35900 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT20P35900 KRT8P3-201ENST00000519669 1449 ntBASIC17.45■□□□□ 0.38
KRT20P35900 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT20P35900 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.45■□□□□ 0.38
KRT20P35900 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT20P35900 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.44■□□□□ 0.38
KRT20P35900 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT20P35900 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT20P35900 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT20P35900 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT20P35900 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT20P35900 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms