Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
KRT9P35527 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.11■□□□□ 0.81
KRT9P35527 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
KRT9P35527 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.11■□□□□ 0.81
KRT9P35527 SLC25A6P5-201ENST00000435663 894 ntBASIC20.11■□□□□ 0.81
KRT9P35527 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
KRT9P35527 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.11■□□□□ 0.81
KRT9P35527 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.11■□□□□ 0.81
KRT9P35527 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
KRT9P35527 REXO1L10P-201ENST00000615707 1290 ntBASIC20.11■□□□□ 0.81
KRT9P35527 REXO1L12P-201ENST00000622156 912 ntBASIC20.11■□□□□ 0.81
KRT9P35527 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
KRT9P35527 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KRT9P35527 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
KRT9P35527 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.11■□□□□ 0.81
KRT9P35527 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
KRT9P35527 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT9P35527 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KRT9P35527 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT9P35527 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.1■□□□□ 0.81
KRT9P35527 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT9P35527 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KRT9P35527 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.1■□□□□ 0.81
KRT9P35527 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT9P35527 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT9P35527 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT9P35527 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KRT9P35527 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.1■□□□□ 0.81
KRT9P35527 AP003071.4-201ENST00000562276 1284 ntBASIC20.1■□□□□ 0.81
KRT9P35527 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.1■□□□□ 0.81
KRT9P35527 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.1■□□□□ 0.81
KRT9P35527 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.1■□□□□ 0.81
KRT9P35527 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
KRT9P35527 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT9P35527 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT9P35527 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT9P35527 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KRT9P35527 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT9P35527 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.1■□□□□ 0.81
KRT9P35527 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT9P35527 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT9P35527 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.1■□□□□ 0.81
KRT9P35527 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KRT9P35527 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT9P35527 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT9P35527 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT9P35527 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
KRT9P35527 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT9P35527 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
KRT9P35527 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KRT9P35527 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT9P35527 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT9P35527 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT9P35527 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.09■□□□□ 0.81
KRT9P35527 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.09■□□□□ 0.81
KRT9P35527 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.09■□□□□ 0.81
KRT9P35527 AC097488.1-201ENST00000507834 756 ntBASIC20.09■□□□□ 0.81
KRT9P35527 KRT18P41-201ENST00000518924 1277 ntBASIC20.09■□□□□ 0.81
KRT9P35527 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.09■□□□□ 0.81
KRT9P35527 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.09■□□□□ 0.81
KRT9P35527 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
KRT9P35527 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.09■□□□□ 0.81
KRT9P35527 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT9P35527 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.09■□□□□ 0.81
KRT9P35527 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT9P35527 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.09■□□□□ 0.81
KRT9P35527 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT9P35527 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.09■□□□□ 0.81
KRT9P35527 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.09■□□□□ 0.81
KRT9P35527 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
KRT9P35527 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KRT9P35527 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT9P35527 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT9P35527 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT9P35527 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
KRT9P35527 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
KRT9P35527 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KRT9P35527 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
KRT9P35527 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KRT9P35527 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
KRT9P35527 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.08■□□□□ 0.81
KRT9P35527 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
KRT9P35527 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
KRT9P35527 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
KRT9P35527 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
KRT9P35527 AL109659.2-201ENST00000606809 1674 ntBASIC20.08■□□□□ 0.81
KRT9P35527 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
KRT9P35527 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
KRT9P35527 TSPY7P-201ENST00000431358 1114 ntBASIC20.08■□□□□ 0.81
KRT9P35527 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.08■□□□□ 0.81
KRT9P35527 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.08■□□□□ 0.81
KRT9P35527 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.08■□□□□ 0.81
KRT9P35527 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.08■□□□□ 0.81
KRT9P35527 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.08■□□□□ 0.81
KRT9P35527 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.08■□□□□ 0.8
KRT9P35527 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
KRT9P35527 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
KRT9P35527 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
KRT9P35527 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
KRT9P35527 AC096733.2-201ENST00000609937 1394 ntBASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms