Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CTNNA1P35221 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CTNNA1P35221 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CTNNA1P35221 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTNNA1P35221 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CTNNA1P35221 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.39■□□□□ 0.69
CTNNA1P35221 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CTNNA1P35221 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.39■□□□□ 0.69
CTNNA1P35221 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.39■□□□□ 0.69
CTNNA1P35221 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTNNA1P35221 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTNNA1P35221 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTNNA1P35221 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.39■□□□□ 0.69
CTNNA1P35221 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTNNA1P35221 AL135905.2-201ENST00000584934 1404 ntBASIC19.39■□□□□ 0.69
CTNNA1P35221 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CTNNA1P35221 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTNNA1P35221 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.39■□□□□ 0.69
CTNNA1P35221 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CTNNA1P35221 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTNNA1P35221 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTNNA1P35221 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.39■□□□□ 0.69
CTNNA1P35221 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTNNA1P35221 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTNNA1P35221 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTNNA1P35221 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CTNNA1P35221 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTNNA1P35221 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTNNA1P35221 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
CTNNA1P35221 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTNNA1P35221 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTNNA1P35221 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.38■□□□□ 0.69
CTNNA1P35221 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CTNNA1P35221 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTNNA1P35221 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CTNNA1P35221 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTNNA1P35221 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CTNNA1P35221 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTNNA1P35221 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CTNNA1P35221 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTNNA1P35221 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CTNNA1P35221 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
CTNNA1P35221 MCCD1P1-208ENST00000445732 328 ntBASIC19.38■□□□□ 0.69
CTNNA1P35221 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.38■□□□□ 0.69
CTNNA1P35221 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.38■□□□□ 0.69
CTNNA1P35221 AC116562.2-201ENST00000507042 360 ntBASIC19.38■□□□□ 0.69
CTNNA1P35221 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.38■□□□□ 0.69
CTNNA1P35221 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.38■□□□□ 0.69
CTNNA1P35221 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.38■□□□□ 0.69
CTNNA1P35221 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CTNNA1P35221 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.38■□□□□ 0.69
CTNNA1P35221 AC138028.4-201ENST00000564984 1845 ntBASIC19.38■□□□□ 0.69
CTNNA1P35221 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTNNA1P35221 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.38■□□□□ 0.69
CTNNA1P35221 ITM2C-210ENST00000620962 501 ntBASIC19.38■□□□□ 0.69
CTNNA1P35221 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTNNA1P35221 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTNNA1P35221 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTNNA1P35221 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.37■□□□□ 0.69
CTNNA1P35221 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CTNNA1P35221 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTNNA1P35221 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.37■□□□□ 0.69
CTNNA1P35221 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTNNA1P35221 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTNNA1P35221 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.37■□□□□ 0.69
CTNNA1P35221 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CTNNA1P35221 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CTNNA1P35221 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTNNA1P35221 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
CTNNA1P35221 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTNNA1P35221 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CTNNA1P35221 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CTNNA1P35221 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.37■□□□□ 0.69
CTNNA1P35221 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CTNNA1P35221 MFAP1P1-201ENST00000442257 1255 ntBASIC19.37■□□□□ 0.69
CTNNA1P35221 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.37■□□□□ 0.69
CTNNA1P35221 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.37■□□□□ 0.69
CTNNA1P35221 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.37■□□□□ 0.69
CTNNA1P35221 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.37■□□□□ 0.69
CTNNA1P35221 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.37■□□□□ 0.69
CTNNA1P35221 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
CTNNA1P35221 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTNNA1P35221 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
CTNNA1P35221 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.37■□□□□ 0.69
CTNNA1P35221 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CTNNA1P35221 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTNNA1P35221 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.36■□□□□ 0.69
CTNNA1P35221 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTNNA1P35221 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CTNNA1P35221 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.36■□□□□ 0.69
CTNNA1P35221 LINC00896-202ENST00000609602 2128 ntBASIC19.36■□□□□ 0.69
CTNNA1P35221 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTNNA1P35221 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
CTNNA1P35221 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTNNA1P35221 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTNNA1P35221 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.36■□□□□ 0.69
CTNNA1P35221 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CTNNA1P35221 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTNNA1P35221 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.36■□□□□ 0.69
CTNNA1P35221 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms