Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RXRBP28702 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.93■■□□□ 1.42
RXRBP28702 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RXRBP28702 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RXRBP28702 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RXRBP28702 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RXRBP28702 HNRNPFP1-201ENST00000391730 1133 ntBASIC23.93■■□□□ 1.42
RXRBP28702 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC23.93■■□□□ 1.42
RXRBP28702 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RXRBP28702 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
RXRBP28702 CD63-210ENST00000550776 870 ntTSL 5 BASIC23.93■■□□□ 1.42
RXRBP28702 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC23.93■■□□□ 1.42
RXRBP28702 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC23.93■■□□□ 1.42
RXRBP28702 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RXRBP28702 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC23.93■■□□□ 1.42
RXRBP28702 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RXRBP28702 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC23.93■■□□□ 1.42
RXRBP28702 AC004817.3-201ENST00000602957 2129 ntBASIC23.93■■□□□ 1.42
RXRBP28702 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC23.93■■□□□ 1.42
RXRBP28702 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RXRBP28702 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC23.93■■□□□ 1.42
RXRBP28702 KRT8P50-201ENST00000562022 1438 ntBASIC23.93■■□□□ 1.42
RXRBP28702 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RXRBP28702 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RXRBP28702 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RXRBP28702 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RXRBP28702 NEK7-201ENST00000367383 586 ntTSL 2 BASIC23.92■■□□□ 1.42
RXRBP28702 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
RXRBP28702 HNRNPA1P40-201ENST00000426371 1278 ntBASIC23.92■■□□□ 1.42
RXRBP28702 AC055876.3-201ENST00000431496 288 ntBASIC23.92■■□□□ 1.42
RXRBP28702 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RXRBP28702 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RXRBP28702 KRT19P2-202ENST00000557173 1012 ntBASIC23.92■■□□□ 1.42
RXRBP28702 AC138649.4-201ENST00000612222 287 ntBASIC23.92■■□□□ 1.42
RXRBP28702 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC23.92■■□□□ 1.42
RXRBP28702 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RXRBP28702 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RXRBP28702 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RXRBP28702 BCAR1-209ENST00000546196 1340 ntBASIC23.91■■□□□ 1.42
RXRBP28702 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC23.91■■□□□ 1.42
RXRBP28702 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC23.91■■□□□ 1.42
RXRBP28702 AC012676.1-201ENST00000574705 1949 ntBASIC23.91■■□□□ 1.42
RXRBP28702 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RXRBP28702 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RXRBP28702 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RXRBP28702 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC23.91■■□□□ 1.42
RXRBP28702 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC23.91■■□□□ 1.42
RXRBP28702 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC23.91■■□□□ 1.42
RXRBP28702 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RXRBP28702 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC23.91■■□□□ 1.42
RXRBP28702 AC091812.2-201ENST00000619081 385 ntBASIC23.91■■□□□ 1.42
RXRBP28702 AC073592.4-201ENST00000623827 446 ntBASIC23.91■■□□□ 1.42
RXRBP28702 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
RXRBP28702 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RXRBP28702 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC23.91■■□□□ 1.42
RXRBP28702 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RXRBP28702 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RXRBP28702 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
RXRBP28702 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RXRBP28702 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC23.9■■□□□ 1.42
RXRBP28702 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC23.9■■□□□ 1.42
RXRBP28702 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC23.9■■□□□ 1.42
RXRBP28702 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RXRBP28702 FAM207CP-201ENST00000443486 507 ntBASIC23.9■■□□□ 1.42
RXRBP28702 AC074386.1-202ENST00000463561 864 ntBASIC23.9■■□□□ 1.42
RXRBP28702 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
RXRBP28702 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RXRBP28702 LINC02560-201ENST00000596379 459 ntBASIC23.9■■□□□ 1.42
RXRBP28702 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC23.9■■□□□ 1.42
RXRBP28702 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
RXRBP28702 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC23.9■■□□□ 1.42
RXRBP28702 AC004790.2-201ENST00000623588 572 ntBASIC23.9■■□□□ 1.42
RXRBP28702 AC008761.3-201ENST00000624803 892 ntBASIC23.9■■□□□ 1.42
RXRBP28702 AL358472.5-202ENST00000641448 1267 ntBASIC23.9■■□□□ 1.42
RXRBP28702 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RXRBP28702 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RXRBP28702 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RXRBP28702 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
RXRBP28702 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RXRBP28702 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RXRBP28702 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RXRBP28702 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC23.89■■□□□ 1.42
RXRBP28702 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
RXRBP28702 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RXRBP28702 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RXRBP28702 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC23.89■■□□□ 1.42
RXRBP28702 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RXRBP28702 IGLL3P-201ENST00000412472 434 ntBASIC23.89■■□□□ 1.41
RXRBP28702 ELK2BP-201ENST00000415014 1224 ntBASIC23.89■■□□□ 1.41
RXRBP28702 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC23.89■■□□□ 1.41
RXRBP28702 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC23.89■■□□□ 1.41
RXRBP28702 UGT1A2P-201ENST00000454886 866 ntBASIC23.89■■□□□ 1.41
RXRBP28702 AC022145.2-201ENST00000598203 171 ntBASIC23.89■■□□□ 1.41
RXRBP28702 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.89■■□□□ 1.41
RXRBP28702 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
RXRBP28702 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RXRBP28702 AL163051.1-201ENST00000569214 1512 ntBASIC23.89■■□□□ 1.41
RXRBP28702 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
RXRBP28702 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RXRBP28702 NARF-204ENST00000390006 1766 ntTSL 2 BASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms