Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
LMO1P25800 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.41■□□□□ 0.06
LMO1P25800 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.41■□□□□ 0.06
LMO1P25800 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.41■□□□□ 0.06
LMO1P25800 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.41■□□□□ 0.06
LMO1P25800 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.41■□□□□ 0.06
LMO1P25800 AC009065.1-201ENST00000564055 1225 ntBASIC15.41■□□□□ 0.06
LMO1P25800 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.41■□□□□ 0.06
LMO1P25800 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.41■□□□□ 0.06
LMO1P25800 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LMO1P25800 AC112497.1-201ENST00000624824 639 ntBASIC15.41■□□□□ 0.06
LMO1P25800 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.41■□□□□ 0.06
LMO1P25800 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LMO1P25800 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.41■□□□□ 0.06
LMO1P25800 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
LMO1P25800 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
LMO1P25800 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LMO1P25800 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.41■□□□□ 0.06
LMO1P25800 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LMO1P25800 KRT8P9-201ENST00000558927 1449 ntBASIC15.41■□□□□ 0.06
LMO1P25800 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LMO1P25800 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.41■□□□□ 0.06
LMO1P25800 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.41■□□□□ 0.06
LMO1P25800 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LMO1P25800 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LMO1P25800 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LMO1P25800 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
LMO1P25800 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LMO1P25800 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LMO1P25800 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LMO1P25800 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.4■□□□□ 0.06
LMO1P25800 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LMO1P25800 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LMO1P25800 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LMO1P25800 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LMO1P25800 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LMO1P25800 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.4■□□□□ 0.06
LMO1P25800 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LMO1P25800 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LMO1P25800 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.4■□□□□ 0.06
LMO1P25800 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LMO1P25800 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
LMO1P25800 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.4■□□□□ 0.06
LMO1P25800 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LMO1P25800 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LMO1P25800 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LMO1P25800 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LMO1P25800 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.4■□□□□ 0.06
LMO1P25800 INGX-201ENST00000359239 846 ntBASIC15.4■□□□□ 0.06
LMO1P25800 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
LMO1P25800 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.4■□□□□ 0.06
LMO1P25800 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LMO1P25800 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.4■□□□□ 0.06
LMO1P25800 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LMO1P25800 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.4■□□□□ 0.06
LMO1P25800 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LMO1P25800 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LMO1P25800 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LMO1P25800 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LMO1P25800 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.4■□□□□ 0.06
LMO1P25800 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LMO1P25800 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LMO1P25800 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
LMO1P25800 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.39■□□□□ 0.05
LMO1P25800 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LMO1P25800 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.39■□□□□ 0.05
LMO1P25800 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.39■□□□□ 0.05
LMO1P25800 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.39■□□□□ 0.05
LMO1P25800 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LMO1P25800 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
LMO1P25800 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LMO1P25800 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LMO1P25800 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LMO1P25800 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LMO1P25800 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LMO1P25800 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LMO1P25800 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.39■□□□□ 0.05
LMO1P25800 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.39■□□□□ 0.05
LMO1P25800 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LMO1P25800 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.39■□□□□ 0.05
LMO1P25800 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.39■□□□□ 0.05
LMO1P25800 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
LMO1P25800 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LMO1P25800 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.39■□□□□ 0.05
LMO1P25800 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LMO1P25800 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
LMO1P25800 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.39■□□□□ 0.05
LMO1P25800 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LMO1P25800 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
LMO1P25800 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
LMO1P25800 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LMO1P25800 AC141586.5-201ENST00000624546 2050 ntBASIC15.39■□□□□ 0.05
LMO1P25800 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LMO1P25800 AC106820.2-201ENST00000563775 3264 ntBASIC15.39■□□□□ 0.05
LMO1P25800 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LMO1P25800 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.38■□□□□ 0.05
LMO1P25800 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.38■□□□□ 0.05
LMO1P25800 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LMO1P25800 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LMO1P25800 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms