Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MMP8P22894 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.3■□□□□ 0.68
MMP8P22894 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MMP8P22894 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP8P22894 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP8P22894 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.3■□□□□ 0.68
MMP8P22894 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP8P22894 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
MMP8P22894 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
MMP8P22894 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP8P22894 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP8P22894 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MMP8P22894 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MMP8P22894 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
MMP8P22894 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
MMP8P22894 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
MMP8P22894 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MMP8P22894 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MMP8P22894 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.29■□□□□ 0.68
MMP8P22894 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
MMP8P22894 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MMP8P22894 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MMP8P22894 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
MMP8P22894 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MMP8P22894 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.29■□□□□ 0.68
MMP8P22894 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MMP8P22894 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.29■□□□□ 0.68
MMP8P22894 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MMP8P22894 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MMP8P22894 AC211429.1-201ENST00000415277 523 ntBASIC19.29■□□□□ 0.68
MMP8P22894 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.29■□□□□ 0.68
MMP8P22894 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.29■□□□□ 0.68
MMP8P22894 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
MMP8P22894 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
MMP8P22894 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.29■□□□□ 0.68
MMP8P22894 AL023973.1-201ENST00000624619 620 ntBASIC19.29■□□□□ 0.68
MMP8P22894 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
MMP8P22894 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MMP8P22894 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
MMP8P22894 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MMP8P22894 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MMP8P22894 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MMP8P22894 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.29■□□□□ 0.68
MMP8P22894 AC093010.1-201ENST00000473625 1624 ntBASIC19.29■□□□□ 0.68
MMP8P22894 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MMP8P22894 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
MMP8P22894 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MMP8P22894 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.28■□□□□ 0.68
MMP8P22894 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
MMP8P22894 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MMP8P22894 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.28■□□□□ 0.68
MMP8P22894 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.28■□□□□ 0.68
MMP8P22894 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
MMP8P22894 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.28■□□□□ 0.68
MMP8P22894 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
MMP8P22894 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
MMP8P22894 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MMP8P22894 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.28■□□□□ 0.68
MMP8P22894 ATP5G1P1-201ENST00000448724 379 ntBASIC19.28■□□□□ 0.68
MMP8P22894 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
MMP8P22894 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.28■□□□□ 0.68
MMP8P22894 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.28■□□□□ 0.68
MMP8P22894 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.28■□□□□ 0.68
MMP8P22894 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.28■□□□□ 0.68
MMP8P22894 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
MMP8P22894 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.28■□□□□ 0.68
MMP8P22894 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
MMP8P22894 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MMP8P22894 FLJ13224-201ENST00000313737 1514 ntBASIC19.28■□□□□ 0.68
MMP8P22894 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MMP8P22894 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
MMP8P22894 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MMP8P22894 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MMP8P22894 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MMP8P22894 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MMP8P22894 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.28■□□□□ 0.68
MMP8P22894 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MMP8P22894 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
MMP8P22894 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MMP8P22894 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
MMP8P22894 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MMP8P22894 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP8P22894 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP8P22894 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP8P22894 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP8P22894 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP8P22894 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MMP8P22894 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP8P22894 AL133373.2-201ENST00000623187 2828 ntBASIC19.27■□□□□ 0.68
MMP8P22894 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MMP8P22894 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.27■□□□□ 0.68
MMP8P22894 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP8P22894 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP8P22894 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.27■□□□□ 0.68
MMP8P22894 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.27■□□□□ 0.68
MMP8P22894 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP8P22894 AL137013.1-201ENST00000432946 1228 ntBASIC19.27■□□□□ 0.68
MMP8P22894 PVRIG2P-201ENST00000435460 978 ntBASIC19.27■□□□□ 0.68
MMP8P22894 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.27■□□□□ 0.68
MMP8P22894 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms