Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 AL162741.1-201ENST00000565563 1558 ntBASIC21.83■■□□□ 1.09
NCLP19338 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NCLP19338 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.83■■□□□ 1.09
NCLP19338 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NCLP19338 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.83■■□□□ 1.09
NCLP19338 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NCLP19338 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
NCLP19338 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.83■■□□□ 1.09
NCLP19338 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
NCLP19338 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NCLP19338 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.83■■□□□ 1.09
NCLP19338 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.83■■□□□ 1.09
NCLP19338 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.83■■□□□ 1.09
NCLP19338 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.83■■□□□ 1.09
NCLP19338 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NCLP19338 AC110285.5-201ENST00000611501 352 ntBASIC21.83■■□□□ 1.09
NCLP19338 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.83■■□□□ 1.09
NCLP19338 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.83■■□□□ 1.09
NCLP19338 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NCLP19338 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
NCLP19338 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
NCLP19338 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
NCLP19338 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
NCLP19338 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
NCLP19338 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.08
NCLP19338 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC21.83■■□□□ 1.08
NCLP19338 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.83■■□□□ 1.08
NCLP19338 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.83■■□□□ 1.08
NCLP19338 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
NCLP19338 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NCLP19338 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
NCLP19338 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NCLP19338 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NCLP19338 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.82■■□□□ 1.08
NCLP19338 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NCLP19338 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NCLP19338 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NCLP19338 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.82■■□□□ 1.08
NCLP19338 KRASP1-201ENST00000407852 552 ntBASIC21.82■■□□□ 1.08
NCLP19338 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NCLP19338 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.82■■□□□ 1.08
NCLP19338 HLA-A-209ENST00000638375 975 ntBASIC21.82■■□□□ 1.08
NCLP19338 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.82■■□□□ 1.08
NCLP19338 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
NCLP19338 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.82■■□□□ 1.08
NCLP19338 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC21.81■■□□□ 1.08
NCLP19338 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NCLP19338 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NCLP19338 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.81■■□□□ 1.08
NCLP19338 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NCLP19338 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
NCLP19338 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NCLP19338 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NCLP19338 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
NCLP19338 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NCLP19338 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.81■■□□□ 1.08
NCLP19338 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NCLP19338 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.81■■□□□ 1.08
NCLP19338 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.81■■□□□ 1.08
NCLP19338 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.81■■□□□ 1.08
NCLP19338 NBPF21P-201ENST00000425093 1451 ntBASIC21.81■■□□□ 1.08
NCLP19338 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NCLP19338 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NCLP19338 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
NCLP19338 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NCLP19338 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NCLP19338 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NCLP19338 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.8■■□□□ 1.08
NCLP19338 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NCLP19338 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC21.8■■□□□ 1.08
NCLP19338 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NCLP19338 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NCLP19338 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
NCLP19338 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NCLP19338 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NCLP19338 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.8■■□□□ 1.08
NCLP19338 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NCLP19338 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
NCLP19338 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.8■■□□□ 1.08
NCLP19338 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
NCLP19338 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.8■■□□□ 1.08
NCLP19338 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.8■■□□□ 1.08
NCLP19338 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
NCLP19338 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC21.8■■□□□ 1.08
NCLP19338 ESPNP-201ENST00000270691 2015 ntBASIC21.8■■□□□ 1.08
NCLP19338 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
NCLP19338 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NCLP19338 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.8■■□□□ 1.08
NCLP19338 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
NCLP19338 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NCLP19338 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NCLP19338 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.8■■□□□ 1.08
NCLP19338 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NCLP19338 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NCLP19338 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NCLP19338 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NCLP19338 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NCLP19338 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NCLP19338 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
NCLP19338 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms