Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DOBP13765 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DOBP13765 AC104390.1-201ENST00000555663 520 ntBASIC16.46■□□□□ 0.23
HLA-DOBP13765 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.46■□□□□ 0.23
HLA-DOBP13765 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.46■□□□□ 0.23
HLA-DOBP13765 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DOBP13765 AC024243.1-201ENST00000609234 778 ntBASIC16.46■□□□□ 0.23
HLA-DOBP13765 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
HLA-DOBP13765 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DOBP13765 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DOBP13765 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.46■□□□□ 0.23
HLA-DOBP13765 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.46■□□□□ 0.23
HLA-DOBP13765 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DOBP13765 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DOBP13765 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DOBP13765 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
HLA-DOBP13765 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
HLA-DOBP13765 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
HLA-DOBP13765 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HLA-DOBP13765 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
HLA-DOBP13765 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HLA-DOBP13765 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.22
HLA-DOBP13765 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DOBP13765 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DOBP13765 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DOBP13765 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DOBP13765 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DOBP13765 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.45■□□□□ 0.22
HLA-DOBP13765 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DOBP13765 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DOBP13765 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DOBP13765 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DOBP13765 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DOBP13765 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.45■□□□□ 0.22
HLA-DOBP13765 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
HLA-DOBP13765 SLC25A3P1-201ENST00000443844 931 ntBASIC16.45■□□□□ 0.22
HLA-DOBP13765 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DOBP13765 AC010203.1-204ENST00000548782 407 ntBASIC16.45■□□□□ 0.22
HLA-DOBP13765 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DOBP13765 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DOBP13765 AC012306.2-201ENST00000609350 630 ntBASIC16.45■□□□□ 0.22
HLA-DOBP13765 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
HLA-DOBP13765 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DOBP13765 AL162741.1-201ENST00000565563 1558 ntBASIC16.45■□□□□ 0.22
HLA-DOBP13765 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HLA-DOBP13765 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DOBP13765 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.45■□□□□ 0.22
HLA-DOBP13765 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.45■□□□□ 0.22
HLA-DOBP13765 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DOBP13765 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HLA-DOBP13765 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DOBP13765 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
HLA-DOBP13765 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DOBP13765 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HLA-DOBP13765 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DOBP13765 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DOBP13765 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DOBP13765 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DOBP13765 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DOBP13765 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DOBP13765 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
HLA-DOBP13765 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DOBP13765 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DOBP13765 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.44■□□□□ 0.22
HLA-DOBP13765 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DOBP13765 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DOBP13765 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.44■□□□□ 0.22
HLA-DOBP13765 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HLA-DOBP13765 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DOBP13765 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DOBP13765 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.44■□□□□ 0.22
HLA-DOBP13765 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DOBP13765 AC009102.3-201ENST00000623118 1491 ntBASIC16.44■□□□□ 0.22
HLA-DOBP13765 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HLA-DOBP13765 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DOBP13765 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.44■□□□□ 0.22
HLA-DOBP13765 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DOBP13765 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DOBP13765 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DOBP13765 ECEL1P3-201ENST00000427961 737 ntBASIC16.44■□□□□ 0.22
HLA-DOBP13765 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
HLA-DOBP13765 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DOBP13765 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.44■□□□□ 0.22
HLA-DOBP13765 SEC1P-202ENST00000473944 940 ntBASIC16.44■□□□□ 0.22
HLA-DOBP13765 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.44■□□□□ 0.22
HLA-DOBP13765 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.44■□□□□ 0.22
HLA-DOBP13765 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.44■□□□□ 0.22
HLA-DOBP13765 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.44■□□□□ 0.22
HLA-DOBP13765 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.44■□□□□ 0.22
HLA-DOBP13765 AL512604.3-201ENST00000569583 964 ntBASIC16.44■□□□□ 0.22
HLA-DOBP13765 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DOBP13765 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.44■□□□□ 0.22
HLA-DOBP13765 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.44■□□□□ 0.22
HLA-DOBP13765 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.44■□□□□ 0.22
HLA-DOBP13765 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DOBP13765 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.44■□□□□ 0.22
HLA-DOBP13765 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
HLA-DOBP13765 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DOBP13765 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.44■□□□□ 0.22
HLA-DOBP13765 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms