Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LINGO3P0C6S8 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LINGO3P0C6S8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINGO3P0C6S8 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
LINGO3P0C6S8 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LINGO3P0C6S8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LINGO3P0C6S8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINGO3P0C6S8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LINGO3P0C6S8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
LINGO3P0C6S8 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINGO3P0C6S8 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINGO3P0C6S8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LINGO3P0C6S8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LINGO3P0C6S8 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.77■□□□□ 0.44
LINGO3P0C6S8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
LINGO3P0C6S8 KRT18P16-201ENST00000510337 1294 ntBASIC17.77■□□□□ 0.44
LINGO3P0C6S8 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.77■□□□□ 0.44
LINGO3P0C6S8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.77■□□□□ 0.44
LINGO3P0C6S8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
LINGO3P0C6S8 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
LINGO3P0C6S8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.77■□□□□ 0.44
LINGO3P0C6S8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.77■□□□□ 0.44
LINGO3P0C6S8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.77■□□□□ 0.44
LINGO3P0C6S8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.77■□□□□ 0.44
LINGO3P0C6S8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINGO3P0C6S8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.77■□□□□ 0.44
LINGO3P0C6S8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.77■□□□□ 0.44
LINGO3P0C6S8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINGO3P0C6S8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.77■□□□□ 0.44
LINGO3P0C6S8 AC068418.2-201ENST00000577309 3703 ntBASIC17.77■□□□□ 0.43
LINGO3P0C6S8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.77■□□□□ 0.43
LINGO3P0C6S8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
LINGO3P0C6S8 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LINGO3P0C6S8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
LINGO3P0C6S8 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINGO3P0C6S8 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINGO3P0C6S8 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINGO3P0C6S8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.76■□□□□ 0.43
LINGO3P0C6S8 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
LINGO3P0C6S8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
LINGO3P0C6S8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINGO3P0C6S8 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.76■□□□□ 0.43
LINGO3P0C6S8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINGO3P0C6S8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LINGO3P0C6S8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.76■□□□□ 0.43
LINGO3P0C6S8 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINGO3P0C6S8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINGO3P0C6S8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.76■□□□□ 0.43
LINGO3P0C6S8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.76■□□□□ 0.43
LINGO3P0C6S8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.76■□□□□ 0.43
LINGO3P0C6S8 AC098590.1-201ENST00000468126 897 ntBASIC17.76■□□□□ 0.43
LINGO3P0C6S8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
LINGO3P0C6S8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.76■□□□□ 0.43
LINGO3P0C6S8 AL359736.2-201ENST00000621992 437 ntBASIC17.76■□□□□ 0.43
LINGO3P0C6S8 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINGO3P0C6S8 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINGO3P0C6S8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINGO3P0C6S8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINGO3P0C6S8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINGO3P0C6S8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINGO3P0C6S8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
LINGO3P0C6S8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.76■□□□□ 0.43
LINGO3P0C6S8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINGO3P0C6S8 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.76■□□□□ 0.43
LINGO3P0C6S8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINGO3P0C6S8 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 AC110285.5-201ENST00000611501 352 ntBASIC17.75■□□□□ 0.43
LINGO3P0C6S8 TMEM191A-211ENST00000637163 1067 ntBASIC17.75■□□□□ 0.43
LINGO3P0C6S8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 PCDHB19P-201ENST00000570871 2371 ntBASIC17.75■□□□□ 0.43
LINGO3P0C6S8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LINGO3P0C6S8 ZNF815P-204ENST00000434898 1737 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms