Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 TOB2P1-201ENST00000469761 992 ntBASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 GUSBP12-201ENST00000513727 720 ntBASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 RN7SL510P-201ENST00000581311 263 ntBASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 AL121772.3-201ENST00000610840 674 ntBASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 AC120498.9-201ENST00000339021 3867 ntBASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 MTMR9LP-203ENST00000426597 1545 ntBASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 TSPY19P-201ENST00000418461 509 ntBASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 TSPY18P-201ENST00000441642 509 ntBASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40ALP0C0E4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB40ALP0C0E4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB40ALP0C0E4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB40ALP0C0E4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB40ALP0C0E4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RAB40ALP0C0E4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB40ALP0C0E4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RAB40ALP0C0E4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RAB40ALP0C0E4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB40ALP0C0E4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB40ALP0C0E4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB40ALP0C0E4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.27■□□□□ 0.36
RAB40ALP0C0E4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB40ALP0C0E4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB40ALP0C0E4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB40ALP0C0E4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB40ALP0C0E4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB40ALP0C0E4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.27■□□□□ 0.36
RAB40ALP0C0E4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
RAB40ALP0C0E4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.27■□□□□ 0.36
RAB40ALP0C0E4 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.27■□□□□ 0.36
RAB40ALP0C0E4 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.27■□□□□ 0.36
RAB40ALP0C0E4 AC083906.6-201ENST00000641366 219 ntBASIC17.27■□□□□ 0.36
RAB40ALP0C0E4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.27■□□□□ 0.36
RAB40ALP0C0E4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB40ALP0C0E4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.27■□□□□ 0.35
RAB40ALP0C0E4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
RAB40ALP0C0E4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.27■□□□□ 0.35
RAB40ALP0C0E4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB40ALP0C0E4 AC138932.1-201ENST00000534164 6830 ntBASIC17.27■□□□□ 0.35
RAB40ALP0C0E4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.27■□□□□ 0.35
RAB40ALP0C0E4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB40ALP0C0E4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB40ALP0C0E4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 AL163051.1-201ENST00000569214 1512 ntBASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms