Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.85■□□□□ 0.45
HOXC4P09017 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HOXC4P09017 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.85■□□□□ 0.45
HOXC4P09017 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HOXC4P09017 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
HOXC4P09017 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
HOXC4P09017 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
HOXC4P09017 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.84■□□□□ 0.45
HOXC4P09017 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.84■□□□□ 0.45
HOXC4P09017 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC4P09017 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.84■□□□□ 0.45
HOXC4P09017 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
HOXC4P09017 LINC00602-201ENST00000629776 2065 ntBASIC17.84■□□□□ 0.45
HOXC4P09017 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC4P09017 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC4P09017 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
HOXC4P09017 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC4P09017 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC4P09017 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC4P09017 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC4P09017 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC4P09017 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC4P09017 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC4P09017 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC4P09017 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.84■□□□□ 0.45
HOXC4P09017 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.84■□□□□ 0.45
HOXC4P09017 MTCL1P1-201ENST00000446207 792 ntBASIC17.84■□□□□ 0.45
HOXC4P09017 FAAHP1-202ENST00000446499 1238 ntBASIC17.84■□□□□ 0.45
HOXC4P09017 AC091607.1-201ENST00000490318 1060 ntBASIC17.84■□□□□ 0.45
HOXC4P09017 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.84■□□□□ 0.45
HOXC4P09017 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC4P09017 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC4P09017 AC099336.1-202ENST00000602961 463 ntBASIC17.84■□□□□ 0.45
HOXC4P09017 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.84■□□□□ 0.45
HOXC4P09017 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC4P09017 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
HOXC4P09017 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC4P09017 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.84■□□□□ 0.45
HOXC4P09017 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC4P09017 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC4P09017 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC4P09017 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.84■□□□□ 0.45
HOXC4P09017 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC4P09017 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
HOXC4P09017 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.83■□□□□ 0.45
HOXC4P09017 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HOXC4P09017 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HOXC4P09017 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HOXC4P09017 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.83■□□□□ 0.44
HOXC4P09017 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC4P09017 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
HOXC4P09017 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC4P09017 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC4P09017 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
HOXC4P09017 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.83■□□□□ 0.44
HOXC4P09017 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.83■□□□□ 0.44
HOXC4P09017 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
HOXC4P09017 UNC93B7-201ENST00000509439 705 ntBASIC17.83■□□□□ 0.44
HOXC4P09017 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.83■□□□□ 0.44
HOXC4P09017 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.83■□□□□ 0.44
HOXC4P09017 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
HOXC4P09017 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.83■□□□□ 0.44
HOXC4P09017 LINC01711-201ENST00000598340 967 ntBASIC17.83■□□□□ 0.44
HOXC4P09017 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.83■□□□□ 0.44
HOXC4P09017 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC4P09017 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC4P09017 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC4P09017 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.83■□□□□ 0.44
HOXC4P09017 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC4P09017 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC4P09017 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC4P09017 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.83■□□□□ 0.44
HOXC4P09017 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC4P09017 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC4P09017 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC4P09017 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC4P09017 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC4P09017 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.82■□□□□ 0.44
HOXC4P09017 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.82■□□□□ 0.44
HOXC4P09017 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.82■□□□□ 0.44
HOXC4P09017 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC4P09017 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC4P09017 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC4P09017 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.82■□□□□ 0.44
HOXC4P09017 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
HOXC4P09017 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC4P09017 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.82■□□□□ 0.44
HOXC4P09017 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.82■□□□□ 0.44
HOXC4P09017 MINOS1P3-201ENST00000457048 203 ntBASIC17.82■□□□□ 0.44
HOXC4P09017 AC126763.1-201ENST00000552015 2118 ntBASIC17.82■□□□□ 0.44
HOXC4P09017 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.82■□□□□ 0.44
HOXC4P09017 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.82■□□□□ 0.44
HOXC4P09017 RN7SL510P-201ENST00000581311 263 ntBASIC17.82■□□□□ 0.44
HOXC4P09017 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.82■□□□□ 0.44
HOXC4P09017 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.82■□□□□ 0.44
HOXC4P09017 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.82■□□□□ 0.44
HOXC4P09017 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.82■□□□□ 0.44
HOXC4P09017 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.82■□□□□ 0.44
HOXC4P09017 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.82■□□□□ 0.44
HOXC4P09017 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms