Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.97■□□□□ 0.63
RHOP08100 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.97■□□□□ 0.63
RHOP08100 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RHOP08100 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.97■□□□□ 0.63
RHOP08100 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RHOP08100 GPALPP1-207ENST00000611650 899 ntBASIC18.97■□□□□ 0.63
RHOP08100 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.97■□□□□ 0.63
RHOP08100 AC148477.8-201ENST00000624298 468 ntBASIC18.97■□□□□ 0.63
RHOP08100 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RHOP08100 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RHOP08100 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.97■□□□□ 0.63
RHOP08100 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.97■□□□□ 0.63
RHOP08100 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RHOP08100 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RHOP08100 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.97■□□□□ 0.63
RHOP08100 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RHOP08100 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RHOP08100 IL9RP2-201ENST00000423948 1312 ntBASIC18.97■□□□□ 0.63
RHOP08100 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RHOP08100 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.97■□□□□ 0.63
RHOP08100 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RHOP08100 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RHOP08100 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.96■□□□□ 0.63
RHOP08100 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RHOP08100 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RHOP08100 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RHOP08100 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RHOP08100 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.96■□□□□ 0.63
RHOP08100 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.96■□□□□ 0.63
RHOP08100 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.96■□□□□ 0.63
RHOP08100 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RHOP08100 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
RHOP08100 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.96■□□□□ 0.63
RHOP08100 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.96■□□□□ 0.63
RHOP08100 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RHOP08100 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.96■□□□□ 0.63
RHOP08100 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.96■□□□□ 0.63
RHOP08100 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RHOP08100 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.96■□□□□ 0.63
RHOP08100 AF228730.7-201ENST00000641842 219 ntBASIC18.96■□□□□ 0.63
RHOP08100 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RHOP08100 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RHOP08100 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RHOP08100 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.96■□□□□ 0.63
RHOP08100 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.96■□□□□ 0.63
RHOP08100 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RHOP08100 AL499627.1-201ENST00000569373 2188 ntBASIC18.96■□□□□ 0.63
RHOP08100 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RHOP08100 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
RHOP08100 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.96■□□□□ 0.63
RHOP08100 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RHOP08100 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
RHOP08100 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RHOP08100 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.95■□□□□ 0.62
RHOP08100 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.95■□□□□ 0.62
RHOP08100 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RHOP08100 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
RHOP08100 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RHOP08100 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RHOP08100 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RHOP08100 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RHOP08100 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RHOP08100 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RHOP08100 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.95■□□□□ 0.62
RHOP08100 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RHOP08100 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
RHOP08100 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RHOP08100 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RHOP08100 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.95■□□□□ 0.62
RHOP08100 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.95■□□□□ 0.62
RHOP08100 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.95■□□□□ 0.62
RHOP08100 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.95■□□□□ 0.62
RHOP08100 AC006538.3-201ENST00000612495 578 ntBASIC18.95■□□□□ 0.62
RHOP08100 AC009154.2-201ENST00000621177 724 ntBASIC18.95■□□□□ 0.62
RHOP08100 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
RHOP08100 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.95■□□□□ 0.62
RHOP08100 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.95■□□□□ 0.62
RHOP08100 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.95■□□□□ 0.62
RHOP08100 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.95■□□□□ 0.62
RHOP08100 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RHOP08100 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RHOP08100 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RHOP08100 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RHOP08100 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RHOP08100 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.94■□□□□ 0.62
RHOP08100 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RHOP08100 AC073130.3-201ENST00000624389 2278 ntBASIC18.94■□□□□ 0.62
RHOP08100 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.94■□□□□ 0.62
RHOP08100 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RHOP08100 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RHOP08100 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RHOP08100 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RHOP08100 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RHOP08100 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.94■□□□□ 0.62
RHOP08100 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RHOP08100 MTCL1P1-201ENST00000446207 792 ntBASIC18.94■□□□□ 0.62
RHOP08100 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RHOP08100 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.94■□□□□ 0.62
RHOP08100 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.94■□□□□ 0.62
RHOP08100 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms