Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CAPN1P07384 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.08■□□□□ 0.48
CAPN1P07384 MYC-208ENST00000641036 567 ntBASIC18.08■□□□□ 0.48
CAPN1P07384 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CAPN1P07384 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CAPN1P07384 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CAPN1P07384 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CAPN1P07384 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.08■□□□□ 0.48
CAPN1P07384 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CAPN1P07384 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.08■□□□□ 0.48
CAPN1P07384 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CAPN1P07384 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.07■□□□□ 0.48
CAPN1P07384 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
CAPN1P07384 AC112777.1-201ENST00000540175 1423 ntBASIC18.07■□□□□ 0.48
CAPN1P07384 NOC2LP1-202ENST00000452600 2235 ntBASIC18.07■□□□□ 0.48
CAPN1P07384 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN1P07384 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CAPN1P07384 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN1P07384 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.07■□□□□ 0.48
CAPN1P07384 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN1P07384 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN1P07384 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN1P07384 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN1P07384 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CAPN1P07384 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN1P07384 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.07■□□□□ 0.48
CAPN1P07384 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.07■□□□□ 0.48
CAPN1P07384 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.07■□□□□ 0.48
CAPN1P07384 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.07■□□□□ 0.48
CAPN1P07384 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.07■□□□□ 0.48
CAPN1P07384 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
CAPN1P07384 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CAPN1P07384 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN1P07384 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CAPN1P07384 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN1P07384 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN1P07384 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN1P07384 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN1P07384 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.07■□□□□ 0.48
CAPN1P07384 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.07■□□□□ 0.48
CAPN1P07384 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN1P07384 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN1P07384 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN1P07384 KRT8P45-201ENST00000414328 1447 ntBASIC18.06■□□□□ 0.48
CAPN1P07384 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN1P07384 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN1P07384 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.06■□□□□ 0.48
CAPN1P07384 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CAPN1P07384 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN1P07384 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN1P07384 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN1P07384 AL133373.2-201ENST00000623187 2828 ntBASIC18.06■□□□□ 0.48
CAPN1P07384 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN1P07384 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CAPN1P07384 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.06■□□□□ 0.48
CAPN1P07384 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.06■□□□□ 0.48
CAPN1P07384 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN1P07384 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN1P07384 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.06■□□□□ 0.48
CAPN1P07384 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN1P07384 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN1P07384 AK4P3-201ENST00000418260 669 ntBASIC18.06■□□□□ 0.48
CAPN1P07384 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN1P07384 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.06■□□□□ 0.48
CAPN1P07384 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN1P07384 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN1P07384 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN1P07384 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.06■□□□□ 0.48
CAPN1P07384 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CAPN1P07384 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN1P07384 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN1P07384 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.06■□□□□ 0.48
CAPN1P07384 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN1P07384 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN1P07384 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN1P07384 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.05■□□□□ 0.48
CAPN1P07384 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.05■□□□□ 0.48
CAPN1P07384 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CAPN1P07384 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CAPN1P07384 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.05■□□□□ 0.48
CAPN1P07384 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.05■□□□□ 0.48
CAPN1P07384 AL162741.1-201ENST00000565563 1558 ntBASIC18.05■□□□□ 0.48
CAPN1P07384 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CAPN1P07384 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CAPN1P07384 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.05■□□□□ 0.48
CAPN1P07384 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CAPN1P07384 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.05■□□□□ 0.48
CAPN1P07384 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CAPN1P07384 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.05■□□□□ 0.48
CAPN1P07384 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.05■□□□□ 0.48
CAPN1P07384 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.05■□□□□ 0.48
CAPN1P07384 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.05■□□□□ 0.48
CAPN1P07384 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.05■□□□□ 0.48
CAPN1P07384 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CAPN1P07384 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CAPN1P07384 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CAPN1P07384 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CAPN1P07384 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.05■□□□□ 0.48
CAPN1P07384 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CAPN1P07384 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms