Protein–RNA interactions for Protein: P05090

APOD, Apolipoprotein D, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APODP05090 AL022342.1-201ENST00000400363 863 ntBASIC18.55■□□□□ 0.56
APODP05090 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.55■□□□□ 0.56
APODP05090 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
APODP05090 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.55■□□□□ 0.56
APODP05090 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.55■□□□□ 0.56
APODP05090 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.55■□□□□ 0.56
APODP05090 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.55■□□□□ 0.56
APODP05090 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.55■□□□□ 0.56
APODP05090 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.55■□□□□ 0.56
APODP05090 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.55■□□□□ 0.56
APODP05090 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.55■□□□□ 0.56
APODP05090 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
APODP05090 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.55■□□□□ 0.56
APODP05090 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APODP05090 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
APODP05090 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.55■□□□□ 0.56
APODP05090 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APODP05090 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.54■□□□□ 0.56
APODP05090 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APODP05090 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APODP05090 SDHAP2-201ENST00000455183 2001 ntBASIC18.54■□□□□ 0.56
APODP05090 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
APODP05090 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
APODP05090 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.54■□□□□ 0.56
APODP05090 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APODP05090 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.54■□□□□ 0.56
APODP05090 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APODP05090 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APODP05090 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.54■□□□□ 0.56
APODP05090 MRPL3P1-201ENST00000400109 1033 ntBASIC18.54■□□□□ 0.56
APODP05090 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.54■□□□□ 0.56
APODP05090 AF238378.1-201ENST00000526806 358 ntBASIC18.54■□□□□ 0.56
APODP05090 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APODP05090 MIR5100-201ENST00000579544 119 ntBASIC18.54■□□□□ 0.56
APODP05090 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.54■□□□□ 0.56
APODP05090 AC064862.7-201ENST00000604520 867 ntBASIC18.54■□□□□ 0.56
APODP05090 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APODP05090 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
APODP05090 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.54■□□□□ 0.56
APODP05090 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APODP05090 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APODP05090 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
APODP05090 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.54■□□□□ 0.56
APODP05090 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APODP05090 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
APODP05090 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APODP05090 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APODP05090 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APODP05090 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.53■□□□□ 0.56
APODP05090 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APODP05090 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APODP05090 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APODP05090 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
APODP05090 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
APODP05090 AC099343.3-201ENST00000605834 2503 ntBASIC18.53■□□□□ 0.56
APODP05090 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.53■□□□□ 0.56
APODP05090 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
APODP05090 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APODP05090 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APODP05090 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APODP05090 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APODP05090 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.53■□□□□ 0.56
APODP05090 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.53■□□□□ 0.56
APODP05090 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.53■□□□□ 0.56
APODP05090 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.53■□□□□ 0.56
APODP05090 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
APODP05090 AC114341.1-201ENST00000618070 349 ntBASIC18.53■□□□□ 0.56
APODP05090 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
APODP05090 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
APODP05090 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APODP05090 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APODP05090 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APODP05090 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
APODP05090 AL024508.2-201ENST00000607749 1894 ntBASIC18.52■□□□□ 0.56
APODP05090 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APODP05090 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.52■□□□□ 0.56
APODP05090 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.52■□□□□ 0.56
APODP05090 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APODP05090 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APODP05090 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.52■□□□□ 0.56
APODP05090 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
APODP05090 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.52■□□□□ 0.56
APODP05090 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APODP05090 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.52■□□□□ 0.56
APODP05090 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.52■□□□□ 0.56
APODP05090 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APODP05090 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.52■□□□□ 0.56
APODP05090 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
APODP05090 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.52■□□□□ 0.56
APODP05090 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.52■□□□□ 0.56
APODP05090 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APODP05090 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
APODP05090 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.52■□□□□ 0.55
APODP05090 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
APODP05090 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
APODP05090 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
APODP05090 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
APODP05090 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
APODP05090 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
APODP05090 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms