Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC13.99□□□□□ -0.17
TCRAP04437 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRAP04437 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRAP04437 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRAP04437 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TCRAP04437 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TCRAP04437 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRAP04437 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRAP04437 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRAP04437 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRAP04437 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRAP04437 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC13.99□□□□□ -0.17
TCRAP04437 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRAP04437 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRAP04437 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.99□□□□□ -0.17
TCRAP04437 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC13.99□□□□□ -0.17
TCRAP04437 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TCRAP04437 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
TCRAP04437 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRAP04437 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRAP04437 GMCL1P1-201ENST00000463439 1581 ntBASIC13.99□□□□□ -0.17
TCRAP04437 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC13.99□□□□□ -0.17
TCRAP04437 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TCRAP04437 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRAP04437 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC13.99□□□□□ -0.17
TCRAP04437 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRAP04437 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
TCRAP04437 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TCRAP04437 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRAP04437 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRAP04437 NARF-204ENST00000390006 1766 ntTSL 2 BASIC13.99□□□□□ -0.17
TCRAP04437 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.99□□□□□ -0.17
TCRAP04437 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC13.99□□□□□ -0.17
TCRAP04437 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TCRAP04437 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
TCRAP04437 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TCRAP04437 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.98□□□□□ -0.17
TCRAP04437 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC13.98□□□□□ -0.17
TCRAP04437 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TCRAP04437 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRAP04437 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRAP04437 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRAP04437 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TCRAP04437 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRAP04437 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRAP04437 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TCRAP04437 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC13.98□□□□□ -0.17
TCRAP04437 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TCRAP04437 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.98□□□□□ -0.17
TCRAP04437 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC13.98□□□□□ -0.17
TCRAP04437 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TCRAP04437 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TCRAP04437 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TCRAP04437 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC13.98□□□□□ -0.17
TCRAP04437 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC13.98□□□□□ -0.17
TCRAP04437 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC13.98□□□□□ -0.17
TCRAP04437 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRAP04437 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRAP04437 AL137784.2-201ENST00000607332 1000 ntBASIC13.98□□□□□ -0.17
TCRAP04437 IKBKGP1-201ENST00000612193 1073 ntBASIC13.98□□□□□ -0.17
TCRAP04437 WT1-AS_3.1-201ENST00000613262 234 ntBASIC13.98□□□□□ -0.17
TCRAP04437 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRAP04437 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRAP04437 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRAP04437 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC13.98□□□□□ -0.17
TCRAP04437 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TCRAP04437 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRAP04437 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC13.98□□□□□ -0.17
TCRAP04437 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRAP04437 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TCRAP04437 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TCRAP04437 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRAP04437 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.97□□□□□ -0.17
TCRAP04437 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRAP04437 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
TCRAP04437 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC13.97□□□□□ -0.17
TCRAP04437 PCDHA12-202ENST00000613593 2588 ntBASIC13.97□□□□□ -0.17
TCRAP04437 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
TCRAP04437 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.97□□□□□ -0.17
TCRAP04437 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
TCRAP04437 AC099398.1-201ENST00000567919 2776 ntBASIC13.97□□□□□ -0.17
TCRAP04437 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.97□□□□□ -0.17
TCRAP04437 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRAP04437 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRAP04437 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC13.97□□□□□ -0.17
TCRAP04437 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.97□□□□□ -0.17
TCRAP04437 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRAP04437 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TCRAP04437 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRAP04437 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC13.97□□□□□ -0.17
TCRAP04437 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TCRAP04437 DERL1-203ENST00000419562 918 ntTSL 2 BASIC13.97□□□□□ -0.17
TCRAP04437 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC13.97□□□□□ -0.17
TCRAP04437 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TCRAP04437 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TCRAP04437 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.97□□□□□ -0.17
TCRAP04437 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TCRAP04437 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.97□□□□□ -0.17
TCRAP04437 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRAP04437 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms