Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PDGFAP04085 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PDGFAP04085 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PDGFAP04085 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.14■□□□□ 0.33
PDGFAP04085 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDGFAP04085 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDGFAP04085 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.14■□□□□ 0.33
PDGFAP04085 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PDGFAP04085 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDGFAP04085 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.14■□□□□ 0.33
PDGFAP04085 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDGFAP04085 AP002469.2-201ENST00000531724 424 ntBASIC17.14■□□□□ 0.33
PDGFAP04085 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.14■□□□□ 0.33
PDGFAP04085 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.14■□□□□ 0.33
PDGFAP04085 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.14■□□□□ 0.33
PDGFAP04085 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDGFAP04085 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDGFAP04085 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDGFAP04085 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDGFAP04085 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PDGFAP04085 PCDHB18P-201ENST00000524813 2368 ntBASIC17.14■□□□□ 0.33
PDGFAP04085 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDGFAP04085 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFAP04085 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFAP04085 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFAP04085 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFAP04085 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.13■□□□□ 0.33
PDGFAP04085 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PDGFAP04085 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFAP04085 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFAP04085 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFAP04085 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFAP04085 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.13■□□□□ 0.33
PDGFAP04085 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFAP04085 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.13■□□□□ 0.33
PDGFAP04085 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.13■□□□□ 0.33
PDGFAP04085 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
PDGFAP04085 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.13■□□□□ 0.33
PDGFAP04085 AC138894.3-201ENST00000603787 634 ntBASIC17.13■□□□□ 0.33
PDGFAP04085 GPALPP1-207ENST00000611650 899 ntBASIC17.13■□□□□ 0.33
PDGFAP04085 AC006538.3-201ENST00000612495 578 ntBASIC17.13■□□□□ 0.33
PDGFAP04085 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PDGFAP04085 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PDGFAP04085 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFAP04085 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.13■□□□□ 0.33
PDGFAP04085 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
PDGFAP04085 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFAP04085 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
PDGFAP04085 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.13■□□□□ 0.33
PDGFAP04085 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.13■□□□□ 0.33
PDGFAP04085 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.13■□□□□ 0.33
PDGFAP04085 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.13■□□□□ 0.33
PDGFAP04085 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFAP04085 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFAP04085 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFAP04085 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFAP04085 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFAP04085 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFAP04085 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
PDGFAP04085 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFAP04085 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFAP04085 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PDGFAP04085 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.12■□□□□ 0.33
PDGFAP04085 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.12■□□□□ 0.33
PDGFAP04085 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.12■□□□□ 0.33
PDGFAP04085 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.12■□□□□ 0.33
PDGFAP04085 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PDGFAP04085 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFAP04085 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFAP04085 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFAP04085 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFAP04085 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.12■□□□□ 0.33
PDGFAP04085 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFAP04085 MRPL3P1-201ENST00000400109 1033 ntBASIC17.12■□□□□ 0.33
PDGFAP04085 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFAP04085 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFAP04085 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFAP04085 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.12■□□□□ 0.33
PDGFAP04085 AC079776.4-201ENST00000511039 504 ntBASIC17.12■□□□□ 0.33
PDGFAP04085 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.12■□□□□ 0.33
PDGFAP04085 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.12■□□□□ 0.33
PDGFAP04085 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.12■□□□□ 0.33
PDGFAP04085 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.12■□□□□ 0.33
PDGFAP04085 AC005332.3-201ENST00000589904 676 ntBASIC17.12■□□□□ 0.33
PDGFAP04085 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
PDGFAP04085 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.12■□□□□ 0.33
PDGFAP04085 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PDGFAP04085 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PDGFAP04085 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFAP04085 AC008556.1-201ENST00000610908 2040 ntBASIC17.12■□□□□ 0.33
PDGFAP04085 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
PDGFAP04085 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFAP04085 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PDGFAP04085 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.12■□□□□ 0.33
PDGFAP04085 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFAP04085 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFAP04085 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFAP04085 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFAP04085 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PDGFAP04085 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms