Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
VTNP04004 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.08■□□□□ 0.8
VTNP04004 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
VTNP04004 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
VTNP04004 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.07■□□□□ 0.8
VTNP04004 NSUN5P1-202ENST00000421140 1535 ntBASIC20.07■□□□□ 0.8
VTNP04004 NSUN5P2-203ENST00000457352 1529 ntBASIC20.07■□□□□ 0.8
VTNP04004 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.07■□□□□ 0.8
VTNP04004 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VTNP04004 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VTNP04004 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
VTNP04004 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
VTNP04004 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VTNP04004 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VTNP04004 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VTNP04004 LINC01126-201ENST00000623515 1646 ntBASIC20.07■□□□□ 0.8
VTNP04004 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VTNP04004 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.07■□□□□ 0.8
VTNP04004 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.07■□□□□ 0.8
VTNP04004 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.07■□□□□ 0.8
VTNP04004 AC113404.2-201ENST00000507884 177 ntBASIC20.07■□□□□ 0.8
VTNP04004 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VTNP04004 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.07■□□□□ 0.8
VTNP04004 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.07■□□□□ 0.8
VTNP04004 AC011840.4-201ENST00000578471 627 ntBASIC20.07■□□□□ 0.8
VTNP04004 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.07■□□□□ 0.8
VTNP04004 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VTNP04004 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.07■□□□□ 0.8
VTNP04004 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VTNP04004 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VTNP04004 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VTNP04004 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VTNP04004 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
VTNP04004 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VTNP04004 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VTNP04004 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.06■□□□□ 0.8
VTNP04004 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
VTNP04004 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
VTNP04004 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VTNP04004 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.06■□□□□ 0.8
VTNP04004 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
VTNP04004 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VTNP04004 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VTNP04004 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VTNP04004 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
VTNP04004 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
VTNP04004 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.06■□□□□ 0.8
VTNP04004 VENTXP7-201ENST00000475503 772 ntBASIC20.06■□□□□ 0.8
VTNP04004 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
VTNP04004 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.06■□□□□ 0.8
VTNP04004 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.06■□□□□ 0.8
VTNP04004 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.06■□□□□ 0.8
VTNP04004 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VTNP04004 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
VTNP04004 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
VTNP04004 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.06■□□□□ 0.8
VTNP04004 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
VTNP04004 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.06■□□□□ 0.8
VTNP04004 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VTNP04004 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VTNP04004 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VTNP04004 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.05■□□□□ 0.8
VTNP04004 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VTNP04004 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VTNP04004 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
VTNP04004 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VTNP04004 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VTNP04004 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.05■□□□□ 0.8
VTNP04004 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VTNP04004 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.05■□□□□ 0.8
VTNP04004 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.05■□□□□ 0.8
VTNP04004 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.05■□□□□ 0.8
VTNP04004 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VTNP04004 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VTNP04004 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VTNP04004 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VTNP04004 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.04■□□□□ 0.8
VTNP04004 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VTNP04004 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VTNP04004 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.04■□□□□ 0.8
VTNP04004 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VTNP04004 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
VTNP04004 TSPY12P-201ENST00000421279 868 ntBASIC20.04■□□□□ 0.8
VTNP04004 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VTNP04004 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VTNP04004 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.04■□□□□ 0.8
VTNP04004 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.04■□□□□ 0.8
VTNP04004 AC008687.5-201ENST00000593746 558 ntBASIC20.04■□□□□ 0.8
VTNP04004 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VTNP04004 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VTNP04004 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
VTNP04004 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VTNP04004 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.04■□□□□ 0.8
VTNP04004 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
VTNP04004 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VTNP04004 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VTNP04004 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VTNP04004 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VTNP04004 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VTNP04004 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms