Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
OPN1SWP03999 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
OPN1SWP03999 AL023284.2-201ENST00000405850 579 ntBASIC17.17■□□□□ 0.34
OPN1SWP03999 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
OPN1SWP03999 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
OPN1SWP03999 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.17■□□□□ 0.34
OPN1SWP03999 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
OPN1SWP03999 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.17■□□□□ 0.34
OPN1SWP03999 AL359736.2-201ENST00000621992 437 ntBASIC17.17■□□□□ 0.34
OPN1SWP03999 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
OPN1SWP03999 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.17■□□□□ 0.34
OPN1SWP03999 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
OPN1SWP03999 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
OPN1SWP03999 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
OPN1SWP03999 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
OPN1SWP03999 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
OPN1SWP03999 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
OPN1SWP03999 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
OPN1SWP03999 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
OPN1SWP03999 LINC00896-202ENST00000609602 2128 ntBASIC17.17■□□□□ 0.34
OPN1SWP03999 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
OPN1SWP03999 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.16■□□□□ 0.34
OPN1SWP03999 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.16■□□□□ 0.34
OPN1SWP03999 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
OPN1SWP03999 GNAS-203ENST00000306120 1878 ntBASIC17.16■□□□□ 0.34
OPN1SWP03999 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
OPN1SWP03999 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
OPN1SWP03999 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
OPN1SWP03999 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
OPN1SWP03999 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
OPN1SWP03999 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
OPN1SWP03999 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
OPN1SWP03999 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.16■□□□□ 0.34
OPN1SWP03999 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.16■□□□□ 0.34
OPN1SWP03999 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.16■□□□□ 0.34
OPN1SWP03999 MCCD1P1-208ENST00000445732 328 ntBASIC17.16■□□□□ 0.34
OPN1SWP03999 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.16■□□□□ 0.34
OPN1SWP03999 KRT18P41-201ENST00000518924 1277 ntBASIC17.16■□□□□ 0.34
OPN1SWP03999 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
OPN1SWP03999 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.16■□□□□ 0.34
OPN1SWP03999 AP000692.2-201ENST00000608391 879 ntBASIC17.16■□□□□ 0.34
OPN1SWP03999 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.16■□□□□ 0.34
OPN1SWP03999 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.16■□□□□ 0.34
OPN1SWP03999 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.16■□□□□ 0.34
OPN1SWP03999 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.16■□□□□ 0.34
OPN1SWP03999 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
OPN1SWP03999 FSCN1P1-201ENST00000568912 1481 ntBASIC17.16■□□□□ 0.34
OPN1SWP03999 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
OPN1SWP03999 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
OPN1SWP03999 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.16■□□□□ 0.34
OPN1SWP03999 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.15■□□□□ 0.34
OPN1SWP03999 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
OPN1SWP03999 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.15■□□□□ 0.34
OPN1SWP03999 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
OPN1SWP03999 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
OPN1SWP03999 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
OPN1SWP03999 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
OPN1SWP03999 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.15■□□□□ 0.34
OPN1SWP03999 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
OPN1SWP03999 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
OPN1SWP03999 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
OPN1SWP03999 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.15■□□□□ 0.34
OPN1SWP03999 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
OPN1SWP03999 MIR564-202ENST00000385049 94 ntBASIC17.15■□□□□ 0.34
OPN1SWP03999 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
OPN1SWP03999 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
OPN1SWP03999 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
OPN1SWP03999 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.15■□□□□ 0.34
OPN1SWP03999 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.15■□□□□ 0.34
OPN1SWP03999 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
OPN1SWP03999 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
OPN1SWP03999 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
OPN1SWP03999 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
OPN1SWP03999 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
OPN1SWP03999 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
OPN1SWP03999 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
OPN1SWP03999 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
OPN1SWP03999 AL096828.2-201ENST00000567259 1965 ntBASIC17.15■□□□□ 0.34
OPN1SWP03999 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
OPN1SWP03999 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
OPN1SWP03999 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
OPN1SWP03999 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.15■□□□□ 0.34
OPN1SWP03999 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
OPN1SWP03999 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
OPN1SWP03999 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.14■□□□□ 0.34
OPN1SWP03999 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.14■□□□□ 0.34
OPN1SWP03999 PKD1P1-201ENST00000458669 6805 ntBASIC17.14■□□□□ 0.33
OPN1SWP03999 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.14■□□□□ 0.33
OPN1SWP03999 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.14■□□□□ 0.33
OPN1SWP03999 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
OPN1SWP03999 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
OPN1SWP03999 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.14■□□□□ 0.33
OPN1SWP03999 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
OPN1SWP03999 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
OPN1SWP03999 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
OPN1SWP03999 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
OPN1SWP03999 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
OPN1SWP03999 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.14■□□□□ 0.33
OPN1SWP03999 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
OPN1SWP03999 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms