Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KRT6AP02538 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
KRT6AP02538 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KRT6AP02538 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.79■□□□□ 0.44
KRT6AP02538 ESPNP-201ENST00000270691 2015 ntBASIC17.79■□□□□ 0.44
KRT6AP02538 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
KRT6AP02538 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
KRT6AP02538 GMCL1P1-201ENST00000463439 1581 ntBASIC17.79■□□□□ 0.44
KRT6AP02538 AC036111.1-201ENST00000533973 1582 ntBASIC17.79■□□□□ 0.44
KRT6AP02538 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT6AP02538 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT6AP02538 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
KRT6AP02538 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT6AP02538 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT6AP02538 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT6AP02538 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT6AP02538 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT6AP02538 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
KRT6AP02538 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT6AP02538 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT6AP02538 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT6AP02538 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT6AP02538 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.79■□□□□ 0.44
KRT6AP02538 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT6AP02538 RBM17P1-201ENST00000453646 1190 ntBASIC17.79■□□□□ 0.44
KRT6AP02538 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.79■□□□□ 0.44
KRT6AP02538 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT6AP02538 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.79■□□□□ 0.44
KRT6AP02538 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.79■□□□□ 0.44
KRT6AP02538 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT6AP02538 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.79■□□□□ 0.44
KRT6AP02538 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT6AP02538 MIR4674-201ENST00000582457 87 ntBASIC17.79■□□□□ 0.44
KRT6AP02538 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.79■□□□□ 0.44
KRT6AP02538 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.79■□□□□ 0.44
KRT6AP02538 AL023803.3-201ENST00000615559 522 ntBASIC17.79■□□□□ 0.44
KRT6AP02538 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT6AP02538 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT6AP02538 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT6AP02538 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT6AP02538 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT6AP02538 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT6AP02538 AL133373.2-201ENST00000623187 2828 ntBASIC17.79■□□□□ 0.44
KRT6AP02538 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.79■□□□□ 0.44
KRT6AP02538 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT6AP02538 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT6AP02538 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT6AP02538 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
KRT6AP02538 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.78■□□□□ 0.44
KRT6AP02538 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.78■□□□□ 0.44
KRT6AP02538 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT6AP02538 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
KRT6AP02538 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT6AP02538 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT6AP02538 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT6AP02538 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT6AP02538 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
KRT6AP02538 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT6AP02538 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.78■□□□□ 0.44
KRT6AP02538 CCR12P-201ENST00000446203 998 ntBASIC17.78■□□□□ 0.44
KRT6AP02538 AL353719.1-201ENST00000566847 864 ntBASIC17.78■□□□□ 0.44
KRT6AP02538 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT6AP02538 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.78■□□□□ 0.44
KRT6AP02538 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT6AP02538 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
KRT6AP02538 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
KRT6AP02538 KRT8P7-201ENST00000533003 1432 ntBASIC17.78■□□□□ 0.44
KRT6AP02538 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT6AP02538 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.78■□□□□ 0.44
KRT6AP02538 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT6AP02538 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT6AP02538 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT6AP02538 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.78■□□□□ 0.44
KRT6AP02538 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
KRT6AP02538 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT6AP02538 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
KRT6AP02538 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.78■□□□□ 0.44
KRT6AP02538 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT6AP02538 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT6AP02538 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT6AP02538 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT6AP02538 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.77■□□□□ 0.44
KRT6AP02538 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT6AP02538 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT6AP02538 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT6AP02538 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
KRT6AP02538 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
KRT6AP02538 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KRT6AP02538 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
KRT6AP02538 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
KRT6AP02538 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.77■□□□□ 0.44
KRT6AP02538 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KRT6AP02538 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.77■□□□□ 0.44
KRT6AP02538 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.77■□□□□ 0.44
KRT6AP02538 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
KRT6AP02538 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.77■□□□□ 0.44
KRT6AP02538 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.77■□□□□ 0.44
KRT6AP02538 AP003041.3-201ENST00000527151 707 ntBASIC17.77■□□□□ 0.44
KRT6AP02538 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.77■□□□□ 0.44
KRT6AP02538 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms