Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.38■□□□□ 0.53
PDGFBP01127 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PDGFBP01127 AL078644.1-201ENST00000609881 752 ntBASIC18.38■□□□□ 0.53
PDGFBP01127 AC093028.1-201ENST00000622998 982 ntBASIC18.38■□□□□ 0.53
PDGFBP01127 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFBP01127 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFBP01127 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFBP01127 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.38■□□□□ 0.53
PDGFBP01127 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFBP01127 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFBP01127 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
PDGFBP01127 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.38■□□□□ 0.53
PDGFBP01127 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFBP01127 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFBP01127 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFBP01127 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
PDGFBP01127 IRX1P1-201ENST00000438849 1838 ntBASIC18.37■□□□□ 0.53
PDGFBP01127 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFBP01127 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.37■□□□□ 0.53
PDGFBP01127 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFBP01127 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFBP01127 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFBP01127 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFBP01127 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.37■□□□□ 0.53
PDGFBP01127 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFBP01127 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFBP01127 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.37■□□□□ 0.53
PDGFBP01127 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFBP01127 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.37■□□□□ 0.53
PDGFBP01127 BCRP1-201ENST00000444246 691 ntBASIC18.37■□□□□ 0.53
PDGFBP01127 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFBP01127 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.37■□□□□ 0.53
PDGFBP01127 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFBP01127 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PDGFBP01127 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFBP01127 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFBP01127 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFBP01127 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFBP01127 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.37■□□□□ 0.53
PDGFBP01127 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.37■□□□□ 0.53
PDGFBP01127 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFBP01127 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PDGFBP01127 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.37■□□□□ 0.53
PDGFBP01127 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFBP01127 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.37■□□□□ 0.53
PDGFBP01127 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDGFBP01127 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PDGFBP01127 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDGFBP01127 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDGFBP01127 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.36■□□□□ 0.53
PDGFBP01127 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDGFBP01127 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.36■□□□□ 0.53
PDGFBP01127 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDGFBP01127 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDGFBP01127 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDGFBP01127 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDGFBP01127 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.36■□□□□ 0.53
PDGFBP01127 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PDGFBP01127 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.36■□□□□ 0.53
PDGFBP01127 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.36■□□□□ 0.53
PDGFBP01127 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDGFBP01127 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.36■□□□□ 0.53
PDGFBP01127 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
PDGFBP01127 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.36■□□□□ 0.53
PDGFBP01127 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.36■□□□□ 0.53
PDGFBP01127 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.36■□□□□ 0.53
PDGFBP01127 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PDGFBP01127 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.36■□□□□ 0.53
PDGFBP01127 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PDGFBP01127 AC027612.4-201ENST00000605371 583 ntBASIC18.36■□□□□ 0.53
PDGFBP01127 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.36■□□□□ 0.53
PDGFBP01127 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.36■□□□□ 0.53
PDGFBP01127 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
PDGFBP01127 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDGFBP01127 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDGFBP01127 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDGFBP01127 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFBP01127 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PDGFBP01127 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PDGFBP01127 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.35■□□□□ 0.53
PDGFBP01127 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFBP01127 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFBP01127 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFBP01127 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PDGFBP01127 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFBP01127 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFBP01127 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.35■□□□□ 0.53
PDGFBP01127 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFBP01127 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.35■□□□□ 0.53
PDGFBP01127 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.35■□□□□ 0.53
PDGFBP01127 MIR1199-201ENST00000621445 119 ntBASIC18.35■□□□□ 0.53
PDGFBP01127 AC005593.1-201ENST00000624894 515 ntBASIC18.35■□□□□ 0.53
PDGFBP01127 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.35■□□□□ 0.53
PDGFBP01127 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFBP01127 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFBP01127 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFBP01127 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.35■□□□□ 0.53
PDGFBP01127 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFBP01127 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFBP01127 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms