Protein–RNA interactions for Protein: O94788

ALDH1A2, Retinal dehydrogenase 2, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A2O94788 AC007613.1-201ENST00000572811 2597 ntBASIC19.04■□□□□ 0.64
ALDH1A2O94788 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALDH1A2O94788 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALDH1A2O94788 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALDH1A2O94788 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALDH1A2O94788 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALDH1A2O94788 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALDH1A2O94788 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALDH1A2O94788 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ALDH1A2O94788 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
ALDH1A2O94788 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ALDH1A2O94788 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ALDH1A2O94788 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.04■□□□□ 0.64
ALDH1A2O94788 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
ALDH1A2O94788 BX276092.5-203ENST00000456199 560 ntBASIC19.04■□□□□ 0.64
ALDH1A2O94788 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.04■□□□□ 0.64
ALDH1A2O94788 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.04■□□□□ 0.64
ALDH1A2O94788 PRELID1P1-202ENST00000567272 903 ntBASIC19.04■□□□□ 0.64
ALDH1A2O94788 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ALDH1A2O94788 AC092329.2-201ENST00000598402 547 ntBASIC19.04■□□□□ 0.64
ALDH1A2O94788 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALDH1A2O94788 AL121672.3-201ENST00000608644 468 ntBASIC19.04■□□□□ 0.64
ALDH1A2O94788 AC024243.1-201ENST00000609234 778 ntBASIC19.04■□□□□ 0.64
ALDH1A2O94788 AC092119.3-201ENST00000612618 583 ntBASIC19.04■□□□□ 0.64
ALDH1A2O94788 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.04■□□□□ 0.64
ALDH1A2O94788 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALDH1A2O94788 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
ALDH1A2O94788 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.04■□□□□ 0.64
ALDH1A2O94788 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ALDH1A2O94788 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A2O94788 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
ALDH1A2O94788 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.03■□□□□ 0.64
ALDH1A2O94788 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ALDH1A2O94788 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A2O94788 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A2O94788 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
ALDH1A2O94788 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A2O94788 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ALDH1A2O94788 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A2O94788 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A2O94788 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.03■□□□□ 0.64
ALDH1A2O94788 AC073592.3-201ENST00000625118 1834 ntBASIC19.03■□□□□ 0.64
ALDH1A2O94788 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A2O94788 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A2O94788 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.03■□□□□ 0.64
ALDH1A2O94788 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A2O94788 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A2O94788 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A2O94788 SPDYE13P-201ENST00000445314 798 ntBASIC19.03■□□□□ 0.64
ALDH1A2O94788 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.03■□□□□ 0.64
ALDH1A2O94788 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.03■□□□□ 0.64
ALDH1A2O94788 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A2O94788 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.03■□□□□ 0.64
ALDH1A2O94788 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.03■□□□□ 0.64
ALDH1A2O94788 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A2O94788 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A2O94788 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.03■□□□□ 0.64
ALDH1A2O94788 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A2O94788 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A2O94788 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A2O94788 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ALDH1A2O94788 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A2O94788 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.03■□□□□ 0.64
ALDH1A2O94788 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A2O94788 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A2O94788 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.03■□□□□ 0.64
ALDH1A2O94788 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A2O94788 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
ALDH1A2O94788 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.02■□□□□ 0.64
ALDH1A2O94788 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.02■□□□□ 0.64
ALDH1A2O94788 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.02■□□□□ 0.64
ALDH1A2O94788 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ALDH1A2O94788 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
ALDH1A2O94788 GPAT2P1-201ENST00000444924 1672 ntBASIC19.02■□□□□ 0.64
ALDH1A2O94788 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
ALDH1A2O94788 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ALDH1A2O94788 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ALDH1A2O94788 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ALDH1A2O94788 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.02■□□□□ 0.64
ALDH1A2O94788 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
ALDH1A2O94788 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
ALDH1A2O94788 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.02■□□□□ 0.64
ALDH1A2O94788 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ALDH1A2O94788 MCCD1P1-208ENST00000445732 328 ntBASIC19.02■□□□□ 0.64
ALDH1A2O94788 TSSC2-201ENST00000450217 709 ntBASIC19.02■□□□□ 0.64
ALDH1A2O94788 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.02■□□□□ 0.64
ALDH1A2O94788 AC092597.1-201ENST00000487352 616 ntBASIC19.02■□□□□ 0.64
ALDH1A2O94788 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.02■□□□□ 0.64
ALDH1A2O94788 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.02■□□□□ 0.64
ALDH1A2O94788 AC011498.5-201ENST00000592027 486 ntBASIC19.02■□□□□ 0.64
ALDH1A2O94788 NPAP1P7-201ENST00000613027 823 ntBASIC19.02■□□□□ 0.64
ALDH1A2O94788 AC012313.10-201ENST00000623509 926 ntBASIC19.02■□□□□ 0.64
ALDH1A2O94788 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.02■□□□□ 0.64
ALDH1A2O94788 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.02■□□□□ 0.64
ALDH1A2O94788 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ALDH1A2O94788 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ALDH1A2O94788 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ALDH1A2O94788 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
ALDH1A2O94788 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
ALDH1A2O94788 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms