Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDKL5O76039 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDKL5O76039 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDKL5O76039 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDKL5O76039 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDKL5O76039 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CDKL5O76039 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CDKL5O76039 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDKL5O76039 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDKL5O76039 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDKL5O76039 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.34■■□□□ 1.01
CDKL5O76039 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDKL5O76039 ATP5G1P1-201ENST00000448724 379 ntBASIC21.34■■□□□ 1.01
CDKL5O76039 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
CDKL5O76039 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.34■■□□□ 1.01
CDKL5O76039 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.34■■□□□ 1.01
CDKL5O76039 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDKL5O76039 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDKL5O76039 AC012306.2-201ENST00000609350 630 ntBASIC21.34■■□□□ 1.01
CDKL5O76039 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.34■■□□□ 1.01
CDKL5O76039 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CDKL5O76039 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDKL5O76039 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.34■■□□□ 1.01
CDKL5O76039 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.34■■□□□ 1.01
CDKL5O76039 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CDKL5O76039 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDKL5O76039 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.34■■□□□ 1.01
CDKL5O76039 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.34■■□□□ 1.01
CDKL5O76039 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDKL5O76039 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDKL5O76039 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CDKL5O76039 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.34■■□□□ 1.01
CDKL5O76039 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CDKL5O76039 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
CDKL5O76039 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDKL5O76039 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDKL5O76039 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.33■■□□□ 1.01
CDKL5O76039 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDKL5O76039 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.33■■□□□ 1.01
CDKL5O76039 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.33■■□□□ 1.01
CDKL5O76039 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDKL5O76039 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.33■■□□□ 1.01
CDKL5O76039 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.33■■□□□ 1.01
CDKL5O76039 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.33■■□□□ 1.01
CDKL5O76039 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.33■■□□□ 1.01
CDKL5O76039 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.33■■□□□ 1.01
CDKL5O76039 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDKL5O76039 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.33■■□□□ 1.01
CDKL5O76039 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
CDKL5O76039 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.33■■□□□ 1
CDKL5O76039 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDKL5O76039 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1
CDKL5O76039 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
CDKL5O76039 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDKL5O76039 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
CDKL5O76039 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDKL5O76039 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CDKL5O76039 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDKL5O76039 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.32■■□□□ 1
CDKL5O76039 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CDKL5O76039 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDKL5O76039 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDKL5O76039 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CDKL5O76039 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDKL5O76039 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDKL5O76039 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CDKL5O76039 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.32■■□□□ 1
CDKL5O76039 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.32■■□□□ 1
CDKL5O76039 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.32■■□□□ 1
CDKL5O76039 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CDKL5O76039 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.32■■□□□ 1
CDKL5O76039 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.32■■□□□ 1
CDKL5O76039 MIR3917-201ENST00000580971 93 ntBASIC21.32■■□□□ 1
CDKL5O76039 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.32■■□□□ 1
CDKL5O76039 AC005363.2-201ENST00000618631 242 ntBASIC21.32■■□□□ 1
CDKL5O76039 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDKL5O76039 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDKL5O76039 AC099343.3-201ENST00000605834 2503 ntBASIC21.32■■□□□ 1
CDKL5O76039 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC21.32■■□□□ 1
CDKL5O76039 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDKL5O76039 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CDKL5O76039 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDKL5O76039 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.32■■□□□ 1
CDKL5O76039 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDKL5O76039 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDKL5O76039 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDKL5O76039 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.31■■□□□ 1
CDKL5O76039 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.31■■□□□ 1
CDKL5O76039 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.31■■□□□ 1
CDKL5O76039 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
CDKL5O76039 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDKL5O76039 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDKL5O76039 AC113347.1-201ENST00000413321 391 ntBASIC21.31■■□□□ 1
CDKL5O76039 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.31■■□□□ 1
CDKL5O76039 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CDKL5O76039 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDKL5O76039 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CDKL5O76039 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
CDKL5O76039 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CDKL5O76039 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms