Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 SDHAP2-201ENST00000455183 2001 ntBASIC17.43■□□□□ 0.38
SCN2BO60939 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.43■□□□□ 0.38
SCN2BO60939 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
SCN2BO60939 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SCN2BO60939 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCN2BO60939 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCN2BO60939 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.43■□□□□ 0.38
SCN2BO60939 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCN2BO60939 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCN2BO60939 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCN2BO60939 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCN2BO60939 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SCN2BO60939 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCN2BO60939 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SCN2BO60939 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCN2BO60939 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SCN2BO60939 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCN2BO60939 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCN2BO60939 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCN2BO60939 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCN2BO60939 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SCN2BO60939 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCN2BO60939 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.42■□□□□ 0.38
SCN2BO60939 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SCN2BO60939 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCN2BO60939 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCN2BO60939 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.42■□□□□ 0.38
SCN2BO60939 AP005242.2-201ENST00000580065 1175 ntBASIC17.42■□□□□ 0.38
SCN2BO60939 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.42■□□□□ 0.38
SCN2BO60939 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
SCN2BO60939 AL023803.3-201ENST00000615559 522 ntBASIC17.42■□□□□ 0.38
SCN2BO60939 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCN2BO60939 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.42■□□□□ 0.38
SCN2BO60939 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.42■□□□□ 0.38
SCN2BO60939 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.42■□□□□ 0.38
SCN2BO60939 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCN2BO60939 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SCN2BO60939 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCN2BO60939 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SCN2BO60939 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCN2BO60939 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCN2BO60939 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.41■□□□□ 0.38
SCN2BO60939 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SCN2BO60939 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SCN2BO60939 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
SCN2BO60939 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCN2BO60939 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCN2BO60939 PHGDH-209ENST00000641074 1780 ntBASIC17.41■□□□□ 0.38
SCN2BO60939 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.41■□□□□ 0.38
SCN2BO60939 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.41■□□□□ 0.38
SCN2BO60939 AL096828.2-201ENST00000567259 1965 ntBASIC17.41■□□□□ 0.38
SCN2BO60939 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.41■□□□□ 0.38
SCN2BO60939 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCN2BO60939 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.41■□□□□ 0.38
SCN2BO60939 CRYGFP-201ENST00000418459 633 ntBASIC17.41■□□□□ 0.38
SCN2BO60939 AP001412.1-201ENST00000608405 714 ntBASIC17.41■□□□□ 0.38
SCN2BO60939 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCN2BO60939 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCN2BO60939 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCN2BO60939 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCN2BO60939 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCN2BO60939 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCN2BO60939 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
SCN2BO60939 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.41■□□□□ 0.38
SCN2BO60939 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCN2BO60939 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SCN2BO60939 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCN2BO60939 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.41■□□□□ 0.38
SCN2BO60939 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCN2BO60939 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SCN2BO60939 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCN2BO60939 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.41■□□□□ 0.38
SCN2BO60939 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCN2BO60939 GMCL1P1-201ENST00000463439 1581 ntBASIC17.4■□□□□ 0.38
SCN2BO60939 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCN2BO60939 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SCN2BO60939 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SCN2BO60939 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.4■□□□□ 0.38
SCN2BO60939 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCN2BO60939 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCN2BO60939 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCN2BO60939 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCN2BO60939 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCN2BO60939 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCN2BO60939 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.4■□□□□ 0.38
SCN2BO60939 AC099343.3-201ENST00000605834 2503 ntBASIC17.4■□□□□ 0.38
SCN2BO60939 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCN2BO60939 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.4■□□□□ 0.38
SCN2BO60939 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
SCN2BO60939 AL158047.1-201ENST00000445918 881 ntBASIC17.4■□□□□ 0.38
SCN2BO60939 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCN2BO60939 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.4■□□□□ 0.38
SCN2BO60939 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.4■□□□□ 0.38
SCN2BO60939 Z99916.2-201ENST00000604037 246 ntBASIC17.4■□□□□ 0.38
SCN2BO60939 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCN2BO60939 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCN2BO60939 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
SCN2BO60939 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
SCN2BO60939 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.4■□□□□ 0.38
SCN2BO60939 FLJ13224-201ENST00000313737 1514 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms