Protein–RNA interactions for Protein: O14994

SYN3, Synapsin-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3O14994 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SYN3O14994 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SYN3O14994 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
SYN3O14994 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.33■□□□□ 0.69
SYN3O14994 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SYN3O14994 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.33■□□□□ 0.69
SYN3O14994 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SYN3O14994 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
SYN3O14994 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SYN3O14994 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SYN3O14994 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
SYN3O14994 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYN3O14994 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYN3O14994 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.33■□□□□ 0.68
SYN3O14994 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.33■□□□□ 0.68
SYN3O14994 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.33■□□□□ 0.68
SYN3O14994 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.33■□□□□ 0.68
SYN3O14994 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYN3O14994 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.33■□□□□ 0.68
SYN3O14994 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SYN3O14994 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.33■□□□□ 0.68
SYN3O14994 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.33■□□□□ 0.68
SYN3O14994 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SYN3O14994 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYN3O14994 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYN3O14994 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYN3O14994 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYN3O14994 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYN3O14994 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYN3O14994 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYN3O14994 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.32■□□□□ 0.68
SYN3O14994 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.32■□□□□ 0.68
SYN3O14994 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYN3O14994 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYN3O14994 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYN3O14994 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
SYN3O14994 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYN3O14994 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.32■□□□□ 0.68
SYN3O14994 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYN3O14994 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.32■□□□□ 0.68
SYN3O14994 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SYN3O14994 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYN3O14994 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYN3O14994 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SYN3O14994 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SYN3O14994 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
SYN3O14994 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYN3O14994 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYN3O14994 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYN3O14994 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.32■□□□□ 0.68
SYN3O14994 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYN3O14994 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYN3O14994 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.32■□□□□ 0.68
SYN3O14994 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.32■□□□□ 0.68
SYN3O14994 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.32■□□□□ 0.68
SYN3O14994 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SYN3O14994 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SYN3O14994 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYN3O14994 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYN3O14994 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYN3O14994 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.31■□□□□ 0.68
SYN3O14994 NUS1P2-201ENST00000417358 873 ntBASIC19.31■□□□□ 0.68
SYN3O14994 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.31■□□□□ 0.68
SYN3O14994 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.31■□□□□ 0.68
SYN3O14994 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.31■□□□□ 0.68
SYN3O14994 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.31■□□□□ 0.68
SYN3O14994 BNIP3P18-201ENST00000593976 575 ntBASIC19.31■□□□□ 0.68
SYN3O14994 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.31■□□□□ 0.68
SYN3O14994 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SYN3O14994 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.31■□□□□ 0.68
SYN3O14994 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYN3O14994 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYN3O14994 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYN3O14994 LINC00602-201ENST00000629776 2065 ntBASIC19.31■□□□□ 0.68
SYN3O14994 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYN3O14994 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYN3O14994 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.31■□□□□ 0.68
SYN3O14994 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYN3O14994 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYN3O14994 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.3■□□□□ 0.68
SYN3O14994 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.3■□□□□ 0.68
SYN3O14994 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYN3O14994 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYN3O14994 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYN3O14994 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SYN3O14994 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.3■□□□□ 0.68
SYN3O14994 KRT18P65-201ENST00000439811 1286 ntBASIC19.3■□□□□ 0.68
SYN3O14994 FDX1P1-201ENST00000449115 551 ntBASIC19.3■□□□□ 0.68
SYN3O14994 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.3■□□□□ 0.68
SYN3O14994 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.3■□□□□ 0.68
SYN3O14994 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.3■□□□□ 0.68
SYN3O14994 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.3■□□□□ 0.68
SYN3O14994 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SYN3O14994 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SYN3O14994 KRT8P10-201ENST00000450021 1447 ntBASIC19.3■□□□□ 0.68
SYN3O14994 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYN3O14994 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.3■□□□□ 0.68
SYN3O14994 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
SYN3O14994 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.3■□□□□ 0.68
SYN3O14994 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms