Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.48■□□□□ 0.55
TRIM38O00635 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM38O00635 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TRIM38O00635 NOC2LP2-201ENST00000407594 1944 ntBASIC18.48■□□□□ 0.55
TRIM38O00635 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM38O00635 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TRIM38O00635 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM38O00635 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM38O00635 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TRIM38O00635 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM38O00635 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM38O00635 FP475955.4-201ENST00000623131 1990 ntBASIC18.48■□□□□ 0.55
TRIM38O00635 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TRIM38O00635 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM38O00635 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.47■□□□□ 0.55
TRIM38O00635 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM38O00635 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.47■□□□□ 0.55
TRIM38O00635 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM38O00635 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TRIM38O00635 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM38O00635 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM38O00635 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.47■□□□□ 0.55
TRIM38O00635 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM38O00635 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM38O00635 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM38O00635 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM38O00635 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM38O00635 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.47■□□□□ 0.55
TRIM38O00635 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM38O00635 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
TRIM38O00635 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.47■□□□□ 0.55
TRIM38O00635 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM38O00635 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM38O00635 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.47■□□□□ 0.55
TRIM38O00635 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM38O00635 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM38O00635 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.47■□□□□ 0.55
TRIM38O00635 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM38O00635 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM38O00635 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM38O00635 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM38O00635 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM38O00635 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM38O00635 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM38O00635 SDHAP1-207ENST00000440850 2000 ntBASIC18.46■□□□□ 0.55
TRIM38O00635 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.46■□□□□ 0.55
TRIM38O00635 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM38O00635 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM38O00635 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM38O00635 HBZP1-201ENST00000354915 429 ntBASIC18.46■□□□□ 0.55
TRIM38O00635 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM38O00635 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM38O00635 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM38O00635 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM38O00635 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.46■□□□□ 0.55
TRIM38O00635 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM38O00635 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM38O00635 AC092597.1-201ENST00000487352 616 ntBASIC18.46■□□□□ 0.55
TRIM38O00635 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM38O00635 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM38O00635 AC012313.10-201ENST00000623509 926 ntBASIC18.46■□□□□ 0.55
TRIM38O00635 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM38O00635 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM38O00635 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM38O00635 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM38O00635 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM38O00635 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM38O00635 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM38O00635 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM38O00635 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TRIM38O00635 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM38O00635 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM38O00635 LTB4R2-202ENST00000528054 3092 ntBASIC18.46■□□□□ 0.54
TRIM38O00635 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
TRIM38O00635 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
TRIM38O00635 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
TRIM38O00635 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM38O00635 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM38O00635 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM38O00635 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM38O00635 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM38O00635 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM38O00635 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM38O00635 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM38O00635 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM38O00635 GPAT2P1-201ENST00000444924 1672 ntBASIC18.45■□□□□ 0.54
TRIM38O00635 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM38O00635 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TRIM38O00635 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM38O00635 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM38O00635 ATP5G2P1-201ENST00000433580 426 ntBASIC18.45■□□□□ 0.54
TRIM38O00635 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM38O00635 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM38O00635 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRIM38O00635 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM38O00635 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM38O00635 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM38O00635 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM38O00635 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRIM38O00635 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms