Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN5O00501 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN5O00501 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN5O00501 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.33■□□□□ 0.68
CLDN5O00501 AC104581.1-202ENST00000635932 2618 ntBASIC19.33■□□□□ 0.68
CLDN5O00501 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
CLDN5O00501 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.33■□□□□ 0.68
CLDN5O00501 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CLDN5O00501 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CLDN5O00501 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CLDN5O00501 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN5O00501 AL138781.2-201ENST00000617896 1843 ntBASIC19.32■□□□□ 0.68
CLDN5O00501 AC073592.3-201ENST00000625118 1834 ntBASIC19.32■□□□□ 0.68
CLDN5O00501 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN5O00501 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN5O00501 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN5O00501 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.32■□□□□ 0.68
CLDN5O00501 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN5O00501 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN5O00501 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN5O00501 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CLDN5O00501 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN5O00501 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN5O00501 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.32■□□□□ 0.68
CLDN5O00501 KRT8P26-201ENST00000534154 1276 ntBASIC19.32■□□□□ 0.68
CLDN5O00501 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.32■□□□□ 0.68
CLDN5O00501 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.32■□□□□ 0.68
CLDN5O00501 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.32■□□□□ 0.68
CLDN5O00501 GPR32P1-201ENST00000601788 811 ntBASIC19.32■□□□□ 0.68
CLDN5O00501 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
CLDN5O00501 AL121672.3-201ENST00000608644 468 ntBASIC19.32■□□□□ 0.68
CLDN5O00501 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CLDN5O00501 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.32■□□□□ 0.68
CLDN5O00501 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN5O00501 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN5O00501 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN5O00501 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN5O00501 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
CLDN5O00501 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.32■□□□□ 0.68
CLDN5O00501 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CLDN5O00501 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.32■□□□□ 0.68
CLDN5O00501 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN5O00501 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN5O00501 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.32■□□□□ 0.68
CLDN5O00501 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN5O00501 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN5O00501 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN5O00501 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.31■□□□□ 0.68
CLDN5O00501 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.31■□□□□ 0.68
CLDN5O00501 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN5O00501 AP002383.4-201ENST00000442518 975 ntBASIC19.31■□□□□ 0.68
CLDN5O00501 TSSC2-201ENST00000450217 709 ntBASIC19.31■□□□□ 0.68
CLDN5O00501 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.31■□□□□ 0.68
CLDN5O00501 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.31■□□□□ 0.68
CLDN5O00501 AC004263.2-201ENST00000617183 678 ntBASIC19.31■□□□□ 0.68
CLDN5O00501 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN5O00501 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.31■□□□□ 0.68
CLDN5O00501 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN5O00501 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.31■□□□□ 0.68
CLDN5O00501 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN5O00501 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN5O00501 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN5O00501 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN5O00501 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.31■□□□□ 0.68
CLDN5O00501 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN5O00501 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN5O00501 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CLDN5O00501 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN5O00501 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN5O00501 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN5O00501 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.3■□□□□ 0.68
CLDN5O00501 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.3■□□□□ 0.68
CLDN5O00501 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.3■□□□□ 0.68
CLDN5O00501 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN5O00501 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.3■□□□□ 0.68
CLDN5O00501 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CLDN5O00501 AC092119.3-201ENST00000612618 583 ntBASIC19.3■□□□□ 0.68
CLDN5O00501 NPAP1P7-201ENST00000613027 823 ntBASIC19.3■□□□□ 0.68
CLDN5O00501 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.3■□□□□ 0.68
CLDN5O00501 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN5O00501 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN5O00501 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN5O00501 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN5O00501 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN5O00501 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN5O00501 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
CLDN5O00501 ESPNP-201ENST00000270691 2015 ntBASIC19.3■□□□□ 0.68
CLDN5O00501 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN5O00501 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
CLDN5O00501 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN5O00501 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.3■□□□□ 0.68
CLDN5O00501 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN5O00501 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN5O00501 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN5O00501 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CLDN5O00501 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN5O00501 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN5O00501 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN5O00501 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN5O00501 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms