Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC026271.3-201ENST00000571884 352 ntBASIC19.11■□□□□ 0.65
CCDC188H7C350 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC188H7C350 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC188H7C350 AC011298.2-201ENST00000617989 482 ntBASIC19.11■□□□□ 0.65
CCDC188H7C350 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.11■□□□□ 0.65
CCDC188H7C350 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC188H7C350 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
CCDC188H7C350 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC188H7C350 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC188H7C350 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC188H7C350 AC108860.2-201ENST00000562760 2183 ntBASIC19.1■□□□□ 0.65
CCDC188H7C350 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC188H7C350 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC188H7C350 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CCDC188H7C350 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC188H7C350 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC188H7C350 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC188H7C350 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC188H7C350 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC188H7C350 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC188H7C350 AC133681.1-201ENST00000465482 601 ntBASIC19.1■□□□□ 0.65
CCDC188H7C350 AP002982.1-201ENST00000492365 877 ntBASIC19.1■□□□□ 0.65
CCDC188H7C350 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCDC188H7C350 AC233263.1-201ENST00000578059 224 ntBASIC19.1■□□□□ 0.65
CCDC188H7C350 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC188H7C350 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC188H7C350 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC188H7C350 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC188H7C350 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC188H7C350 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC188H7C350 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CCDC188H7C350 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC188H7C350 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCDC188H7C350 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CCDC188H7C350 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC188H7C350 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC188H7C350 KRT18P55-202ENST00000578578 1546 ntBASIC19.1■□□□□ 0.65
CCDC188H7C350 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC188H7C350 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC188H7C350 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC188H7C350 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC188H7C350 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC188H7C350 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC188H7C350 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC188H7C350 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC188H7C350 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC188H7C350 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC188H7C350 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC188H7C350 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC188H7C350 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC188H7C350 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CCDC188H7C350 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC188H7C350 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC188H7C350 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC188H7C350 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC188H7C350 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CCDC188H7C350 RPS2P4-201ENST00000476944 856 ntBASIC19.09■□□□□ 0.65
CCDC188H7C350 AC026366.1-201ENST00000488803 879 ntBASIC19.09■□□□□ 0.65
CCDC188H7C350 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.09■□□□□ 0.65
CCDC188H7C350 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CCDC188H7C350 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC188H7C350 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC188H7C350 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CCDC188H7C350 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC188H7C350 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CCDC188H7C350 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC188H7C350 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC188H7C350 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC188H7C350 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CCDC188H7C350 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.65
CCDC188H7C350 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CCDC188H7C350 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC188H7C350 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC188H7C350 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.08■□□□□ 0.65
CCDC188H7C350 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC188H7C350 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC188H7C350 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
CCDC188H7C350 FAM207BP-201ENST00000447172 505 ntBASIC19.08■□□□□ 0.64
CCDC188H7C350 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC188H7C350 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC188H7C350 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.08■□□□□ 0.64
CCDC188H7C350 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC188H7C350 AC124016.1-201ENST00000609552 612 ntBASIC19.08■□□□□ 0.64
CCDC188H7C350 AC110285.5-201ENST00000611501 352 ntBASIC19.08■□□□□ 0.64
CCDC188H7C350 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CCDC188H7C350 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC188H7C350 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC188H7C350 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC188H7C350 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC188H7C350 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC188H7C350 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC188H7C350 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC188H7C350 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC188H7C350 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC188H7C350 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC188H7C350 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC188H7C350 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC188H7C350 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC188H7C350 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC188H7C350 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms