Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 AL121894.2-201ENST00000602977 491 ntBASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 AC010240.3-201ENST00000607688 395 ntBASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 AL121672.3-201ENST00000608644 468 ntBASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 HLA-F-220ENST00000434407 884 ntBASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 AC104390.1-201ENST00000555663 520 ntBASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 AL162741.1-201ENST00000565563 1558 ntBASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NPIPA2E9PIF3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NPIPA2E9PIF3 HOXB1-202ENST00000577092 1414 ntBASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 AC034236.2-201ENST00000606662 1610 ntBASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 Z98044.1-201ENST00000632503 1764 ntBASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 AL450487.1-201ENST00000426799 995 ntBASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 TSSC2-201ENST00000450217 709 ntBASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 AC092329.2-201ENST00000598402 547 ntBASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 NPAP1P7-201ENST00000613027 823 ntBASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 AC012313.10-201ENST00000623509 926 ntBASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
NPIPA2E9PIF3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms