Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC21.26■□□□□ 0.99
TMEM88BA6NKF7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMEM88BA6NKF7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.25■□□□□ 0.99
TMEM88BA6NKF7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.25■□□□□ 0.99
TMEM88BA6NKF7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.25■□□□□ 0.99
TMEM88BA6NKF7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TMEM88BA6NKF7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC21.25■□□□□ 0.99
TMEM88BA6NKF7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TMEM88BA6NKF7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TMEM88BA6NKF7 VN2R19P-201ENST00000442399 1052 ntBASIC21.25■□□□□ 0.99
TMEM88BA6NKF7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC21.25■□□□□ 0.99
TMEM88BA6NKF7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
TMEM88BA6NKF7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TMEM88BA6NKF7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TMEM88BA6NKF7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TMEM88BA6NKF7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
TMEM88BA6NKF7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC21.24■□□□□ 0.99
TMEM88BA6NKF7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TMEM88BA6NKF7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM88BA6NKF7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.24■□□□□ 0.99
TMEM88BA6NKF7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM88BA6NKF7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.24■□□□□ 0.99
TMEM88BA6NKF7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM88BA6NKF7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM88BA6NKF7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC21.24■□□□□ 0.99
TMEM88BA6NKF7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC21.24■□□□□ 0.99
TMEM88BA6NKF7 DUT-210ENST00000559935 569 ntTSL 3 BASIC21.24■□□□□ 0.99
TMEM88BA6NKF7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC21.24■□□□□ 0.99
TMEM88BA6NKF7 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC21.24■□□□□ 0.99
TMEM88BA6NKF7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC21.24■□□□□ 0.99
TMEM88BA6NKF7 AC068587.9-201ENST00000641814 219 ntBASIC21.24■□□□□ 0.99
TMEM88BA6NKF7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.24■□□□□ 0.99
TMEM88BA6NKF7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TMEM88BA6NKF7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM88BA6NKF7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM88BA6NKF7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
TMEM88BA6NKF7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM88BA6NKF7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.24■□□□□ 0.99
TMEM88BA6NKF7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM88BA6NKF7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM88BA6NKF7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM88BA6NKF7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM88BA6NKF7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM88BA6NKF7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TMEM88BA6NKF7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TMEM88BA6NKF7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TMEM88BA6NKF7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TMEM88BA6NKF7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TMEM88BA6NKF7 AC007274.1-201ENST00000439805 662 ntBASIC21.23■□□□□ 0.99
TMEM88BA6NKF7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TMEM88BA6NKF7 HCG4B-203ENST00000450128 991 ntBASIC21.23■□□□□ 0.99
TMEM88BA6NKF7 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC21.23■□□□□ 0.99
TMEM88BA6NKF7 AC025678.2-201ENST00000562061 970 ntBASIC21.23■□□□□ 0.99
TMEM88BA6NKF7 MIR4751-201ENST00000578027 74 ntBASIC21.23■□□□□ 0.99
TMEM88BA6NKF7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC21.23■□□□□ 0.99
TMEM88BA6NKF7 AJ011932.1-201ENST00000621707 465 ntBASIC21.23■□□□□ 0.99
TMEM88BA6NKF7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.23■□□□□ 0.99
TMEM88BA6NKF7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.23■□□□□ 0.99
TMEM88BA6NKF7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TMEM88BA6NKF7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
TMEM88BA6NKF7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TMEM88BA6NKF7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TMEM88BA6NKF7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC21.23■□□□□ 0.99
TMEM88BA6NKF7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.22■□□□□ 0.99
TMEM88BA6NKF7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TMEM88BA6NKF7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
TMEM88BA6NKF7 FEM1AP3-201ENST00000403722 1741 ntBASIC21.22■□□□□ 0.99
TMEM88BA6NKF7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
TMEM88BA6NKF7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TMEM88BA6NKF7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TMEM88BA6NKF7 HLA-DRB6-201ENST00000411500 1235 ntBASIC21.22■□□□□ 0.99
TMEM88BA6NKF7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TMEM88BA6NKF7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
TMEM88BA6NKF7 AC005225.4-201ENST00000557330 545 ntBASIC21.22■□□□□ 0.99
TMEM88BA6NKF7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.22■□□□□ 0.99
TMEM88BA6NKF7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TMEM88BA6NKF7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TMEM88BA6NKF7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TMEM88BA6NKF7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TMEM88BA6NKF7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TMEM88BA6NKF7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TMEM88BA6NKF7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TMEM88BA6NKF7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.22■□□□□ 0.99
TMEM88BA6NKF7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TMEM88BA6NKF7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TMEM88BA6NKF7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TMEM88BA6NKF7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.22■□□□□ 0.99
TMEM88BA6NKF7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TMEM88BA6NKF7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TMEM88BA6NKF7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TMEM88BA6NKF7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TMEM88BA6NKF7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.21■□□□□ 0.99
TMEM88BA6NKF7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
TMEM88BA6NKF7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TMEM88BA6NKF7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TMEM88BA6NKF7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC21.21■□□□□ 0.99
TMEM88BA6NKF7 ACTG1P14-201ENST00000446382 1122 ntBASIC21.21■□□□□ 0.99
TMEM88BA6NKF7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.21■□□□□ 0.99
TMEM88BA6NKF7 RNA5SP421-201ENST00000516864 134 ntBASIC21.21■□□□□ 0.99
TMEM88BA6NKF7 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms