Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.42■□□□□ 0.22
TVP23AA6NH52 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TVP23AA6NH52 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.41■□□□□ 0.22
TVP23AA6NH52 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.41■□□□□ 0.22
TVP23AA6NH52 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TVP23AA6NH52 AC020916.1-201ENST00000587762 1774 ntBASIC16.41■□□□□ 0.22
TVP23AA6NH52 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.41■□□□□ 0.22
TVP23AA6NH52 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TVP23AA6NH52 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.41■□□□□ 0.22
TVP23AA6NH52 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.41■□□□□ 0.22
TVP23AA6NH52 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TVP23AA6NH52 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.41■□□□□ 0.22
TVP23AA6NH52 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TVP23AA6NH52 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TVP23AA6NH52 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TVP23AA6NH52 RPS2P55-201ENST00000397318 883 ntBASIC16.41■□□□□ 0.22
TVP23AA6NH52 CRYGFP-201ENST00000418459 633 ntBASIC16.41■□□□□ 0.22
TVP23AA6NH52 AC107956.1-201ENST00000494359 873 ntBASIC16.41■□□□□ 0.22
TVP23AA6NH52 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.41■□□□□ 0.22
TVP23AA6NH52 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.41■□□□□ 0.22
TVP23AA6NH52 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.41■□□□□ 0.22
TVP23AA6NH52 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.41■□□□□ 0.22
TVP23AA6NH52 DGCR10-201ENST00000609839 495 ntBASIC16.41■□□□□ 0.22
TVP23AA6NH52 AC113410.3-201ENST00000623366 203 ntBASIC16.41■□□□□ 0.22
TVP23AA6NH52 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TVP23AA6NH52 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TVP23AA6NH52 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TVP23AA6NH52 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TVP23AA6NH52 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TVP23AA6NH52 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.41■□□□□ 0.22
TVP23AA6NH52 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TVP23AA6NH52 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TVP23AA6NH52 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.41■□□□□ 0.22
TVP23AA6NH52 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TVP23AA6NH52 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TVP23AA6NH52 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TVP23AA6NH52 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.41■□□□□ 0.22
TVP23AA6NH52 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TVP23AA6NH52 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TVP23AA6NH52 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TVP23AA6NH52 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TVP23AA6NH52 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.41■□□□□ 0.22
TVP23AA6NH52 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TVP23AA6NH52 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TVP23AA6NH52 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TVP23AA6NH52 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.4■□□□□ 0.22
TVP23AA6NH52 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TVP23AA6NH52 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TVP23AA6NH52 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.4■□□□□ 0.22
TVP23AA6NH52 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TVP23AA6NH52 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TVP23AA6NH52 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TVP23AA6NH52 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TVP23AA6NH52 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TVP23AA6NH52 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TVP23AA6NH52 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TVP23AA6NH52 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TVP23AA6NH52 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.4■□□□□ 0.22
TVP23AA6NH52 ABHD17AP1-201ENST00000358206 933 ntBASIC16.4■□□□□ 0.22
TVP23AA6NH52 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TVP23AA6NH52 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TVP23AA6NH52 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.4■□□□□ 0.22
TVP23AA6NH52 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.4■□□□□ 0.22
TVP23AA6NH52 GCSHP5-201ENST00000443090 522 ntBASIC16.4■□□□□ 0.22
TVP23AA6NH52 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.4■□□□□ 0.22
TVP23AA6NH52 KRT18P41-201ENST00000518924 1277 ntBASIC16.4■□□□□ 0.22
TVP23AA6NH52 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.4■□□□□ 0.22
TVP23AA6NH52 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.4■□□□□ 0.22
TVP23AA6NH52 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.4■□□□□ 0.22
TVP23AA6NH52 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TVP23AA6NH52 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TVP23AA6NH52 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TVP23AA6NH52 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TVP23AA6NH52 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.4■□□□□ 0.22
TVP23AA6NH52 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TVP23AA6NH52 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TVP23AA6NH52 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TVP23AA6NH52 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TVP23AA6NH52 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TVP23AA6NH52 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TVP23AA6NH52 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.39■□□□□ 0.22
TVP23AA6NH52 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TVP23AA6NH52 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TVP23AA6NH52 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TVP23AA6NH52 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TVP23AA6NH52 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.39■□□□□ 0.21
TVP23AA6NH52 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TVP23AA6NH52 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TVP23AA6NH52 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TVP23AA6NH52 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TVP23AA6NH52 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TVP23AA6NH52 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
TVP23AA6NH52 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TVP23AA6NH52 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.39■□□□□ 0.21
TVP23AA6NH52 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TVP23AA6NH52 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TVP23AA6NH52 UBE2SP1-201ENST00000450587 669 ntBASIC16.39■□□□□ 0.21
TVP23AA6NH52 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.39■□□□□ 0.21
TVP23AA6NH52 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TVP23AA6NH52 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms