Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RCCD1A6NED2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RCCD1A6NED2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RCCD1A6NED2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RCCD1A6NED2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
RCCD1A6NED2 AL163051.1-201ENST00000569214 1512 ntBASIC19.52■□□□□ 0.72
RCCD1A6NED2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RCCD1A6NED2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.52■□□□□ 0.72
RCCD1A6NED2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RCCD1A6NED2 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RCCD1A6NED2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RCCD1A6NED2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RCCD1A6NED2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RCCD1A6NED2 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RCCD1A6NED2 MIR4651-201ENST00000582622 73 ntBASIC19.52■□□□□ 0.72
RCCD1A6NED2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.52■□□□□ 0.72
RCCD1A6NED2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RCCD1A6NED2 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RCCD1A6NED2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.52■□□□□ 0.72
RCCD1A6NED2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RCCD1A6NED2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.52■□□□□ 0.72
RCCD1A6NED2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RCCD1A6NED2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.52■□□□□ 0.72
RCCD1A6NED2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RCCD1A6NED2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
RCCD1A6NED2 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RCCD1A6NED2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
RCCD1A6NED2 SIRPAP1-201ENST00000448467 1770 ntBASIC19.52■□□□□ 0.71
RCCD1A6NED2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.52■□□□□ 0.71
RCCD1A6NED2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RCCD1A6NED2 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RCCD1A6NED2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RCCD1A6NED2 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RCCD1A6NED2 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RCCD1A6NED2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RCCD1A6NED2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RCCD1A6NED2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RCCD1A6NED2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.51■□□□□ 0.71
RCCD1A6NED2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RCCD1A6NED2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RCCD1A6NED2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
RCCD1A6NED2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RCCD1A6NED2 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RCCD1A6NED2 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.51■□□□□ 0.71
RCCD1A6NED2 FAM197Y1-201ENST00000421178 764 ntBASIC19.51■□□□□ 0.71
RCCD1A6NED2 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.51■□□□□ 0.71
RCCD1A6NED2 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.51■□□□□ 0.71
RCCD1A6NED2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.51■□□□□ 0.71
RCCD1A6NED2 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.51■□□□□ 0.71
RCCD1A6NED2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.51■□□□□ 0.71
RCCD1A6NED2 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
RCCD1A6NED2 FSCN1P1-201ENST00000568912 1481 ntBASIC19.51■□□□□ 0.71
RCCD1A6NED2 AC036111.1-201ENST00000533973 1582 ntBASIC19.51■□□□□ 0.71
RCCD1A6NED2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RCCD1A6NED2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RCCD1A6NED2 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RCCD1A6NED2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RCCD1A6NED2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.51■□□□□ 0.71
RCCD1A6NED2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RCCD1A6NED2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RCCD1A6NED2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RCCD1A6NED2 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RCCD1A6NED2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RCCD1A6NED2 AC093010.1-201ENST00000473625 1624 ntBASIC19.51■□□□□ 0.71
RCCD1A6NED2 LINC01126-201ENST00000623515 1646 ntBASIC19.51■□□□□ 0.71
RCCD1A6NED2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RCCD1A6NED2 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RCCD1A6NED2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RCCD1A6NED2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RCCD1A6NED2 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RCCD1A6NED2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RCCD1A6NED2 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.5■□□□□ 0.71
RCCD1A6NED2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.5■□□□□ 0.71
RCCD1A6NED2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.5■□□□□ 0.71
RCCD1A6NED2 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.5■□□□□ 0.71
RCCD1A6NED2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RCCD1A6NED2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RCCD1A6NED2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RCCD1A6NED2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.5■□□□□ 0.71
RCCD1A6NED2 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RCCD1A6NED2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.5■□□□□ 0.71
RCCD1A6NED2 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.5■□□□□ 0.71
RCCD1A6NED2 AC012183.1-201ENST00000625197 499 ntBASIC19.5■□□□□ 0.71
RCCD1A6NED2 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RCCD1A6NED2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.5■□□□□ 0.71
RCCD1A6NED2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RCCD1A6NED2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RCCD1A6NED2 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RCCD1A6NED2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
RCCD1A6NED2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RCCD1A6NED2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.49■□□□□ 0.71
RCCD1A6NED2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.49■□□□□ 0.71
RCCD1A6NED2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RCCD1A6NED2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RCCD1A6NED2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.49■□□□□ 0.71
RCCD1A6NED2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RCCD1A6NED2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RCCD1A6NED2 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
RCCD1A6NED2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RCCD1A6NED2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms