Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM49BA6NDI0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM49BA6NDI0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM49BA6NDI0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM49BA6NDI0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM49BA6NDI0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM49BA6NDI0 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM49BA6NDI0 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM49BA6NDI0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM49BA6NDI0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM49BA6NDI0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.24■□□□□ 0.83
TRIM49BA6NDI0 BX088651.1-201ENST00000540551 451 ntBASIC20.24■□□□□ 0.83
TRIM49BA6NDI0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM49BA6NDI0 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.24■□□□□ 0.83
TRIM49BA6NDI0 C2orf69P3-201ENST00000565542 1120 ntBASIC20.24■□□□□ 0.83
TRIM49BA6NDI0 AC116562.4-202ENST00000641738 218 ntBASIC20.24■□□□□ 0.83
TRIM49BA6NDI0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM49BA6NDI0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
TRIM49BA6NDI0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.24■□□□□ 0.83
TRIM49BA6NDI0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM49BA6NDI0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM49BA6NDI0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM49BA6NDI0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TRIM49BA6NDI0 KRT17P2-201ENST00000300992 1314 ntBASIC20.24■□□□□ 0.83
TRIM49BA6NDI0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TRIM49BA6NDI0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 FZD10-202ENST00000539839 3282 ntBASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 MIR149-201ENST00000384879 89 ntBASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 AC010947.1-201ENST00000623454 693 ntBASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 AC134043.2-201ENST00000624206 2238 ntBASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TRIM49BA6NDI0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TRIM49BA6NDI0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.22■□□□□ 0.83
TRIM49BA6NDI0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM49BA6NDI0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM49BA6NDI0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM49BA6NDI0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM49BA6NDI0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM49BA6NDI0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM49BA6NDI0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.22■□□□□ 0.83
TRIM49BA6NDI0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
TRIM49BA6NDI0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM49BA6NDI0 AP000997.3-201ENST00000623333 2250 ntBASIC20.22■□□□□ 0.83
TRIM49BA6NDI0 TSPY14P-201ENST00000303979 915 ntBASIC20.22■□□□□ 0.83
TRIM49BA6NDI0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TRIM49BA6NDI0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM49BA6NDI0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.22■□□□□ 0.83
TRIM49BA6NDI0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.22■□□□□ 0.83
TRIM49BA6NDI0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.22■□□□□ 0.83
TRIM49BA6NDI0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.22■□□□□ 0.83
TRIM49BA6NDI0 LINC01126-201ENST00000623515 1646 ntBASIC20.22■□□□□ 0.83
TRIM49BA6NDI0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM49BA6NDI0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM49BA6NDI0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM49BA6NDI0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM49BA6NDI0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TRIM49BA6NDI0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM49BA6NDI0 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM49BA6NDI0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM49BA6NDI0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM49BA6NDI0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM49BA6NDI0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.21■□□□□ 0.83
TRIM49BA6NDI0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM49BA6NDI0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM49BA6NDI0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM49BA6NDI0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM49BA6NDI0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM49BA6NDI0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM49BA6NDI0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM49BA6NDI0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TRIM49BA6NDI0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM49BA6NDI0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM49BA6NDI0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM49BA6NDI0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM49BA6NDI0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM49BA6NDI0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms