Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC144AA2RUR9 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC144AA2RUR9 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC26.28■■□□□ 1.8
CCDC144AA2RUR9 KRT18P65-201ENST00000439811 1286 ntBASIC26.28■■□□□ 1.8
CCDC144AA2RUR9 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC26.28■■□□□ 1.8
CCDC144AA2RUR9 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
CCDC144AA2RUR9 AL138831.2-201ENST00000606564 490 ntBASIC26.28■■□□□ 1.8
CCDC144AA2RUR9 TP73-AS1-207ENST00000624167 988 ntBASIC26.28■■□□□ 1.8
CCDC144AA2RUR9 VPS51-217ENST00000639871 243 ntTSL 5 BASIC26.28■■□□□ 1.8
CCDC144AA2RUR9 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC144AA2RUR9 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC144AA2RUR9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
CCDC144AA2RUR9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC144AA2RUR9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC144AA2RUR9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC26.27■■□□□ 1.8
CCDC144AA2RUR9 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
CCDC144AA2RUR9 CROCCP3-202ENST00000420820 1947 ntBASIC26.27■■□□□ 1.8
CCDC144AA2RUR9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC26.27■■□□□ 1.8
CCDC144AA2RUR9 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC144AA2RUR9 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC26.27■■□□□ 1.8
CCDC144AA2RUR9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC144AA2RUR9 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC144AA2RUR9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
CCDC144AA2RUR9 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC144AA2RUR9 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC144AA2RUR9 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.8
CCDC144AA2RUR9 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC26.26■■□□□ 1.79
CCDC144AA2RUR9 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC144AA2RUR9 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
CCDC144AA2RUR9 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC26.26■■□□□ 1.79
CCDC144AA2RUR9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC26.26■■□□□ 1.79
CCDC144AA2RUR9 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC144AA2RUR9 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC26.26■■□□□ 1.79
CCDC144AA2RUR9 MTCL1P1-201ENST00000446207 792 ntBASIC26.26■■□□□ 1.79
CCDC144AA2RUR9 MEG3-211ENST00000452514 461 ntTSL 3 BASIC26.26■■□□□ 1.79
CCDC144AA2RUR9 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC26.26■■□□□ 1.79
CCDC144AA2RUR9 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC26.26■■□□□ 1.79
CCDC144AA2RUR9 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC26.26■■□□□ 1.79
CCDC144AA2RUR9 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC26.26■■□□□ 1.79
CCDC144AA2RUR9 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
CCDC144AA2RUR9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
CCDC144AA2RUR9 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC26.26■■□□□ 1.79
CCDC144AA2RUR9 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC144AA2RUR9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC144AA2RUR9 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC144AA2RUR9 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC144AA2RUR9 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC144AA2RUR9 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
CCDC144AA2RUR9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC144AA2RUR9 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC26.25■■□□□ 1.79
CCDC144AA2RUR9 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC26.25■■□□□ 1.79
CCDC144AA2RUR9 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC144AA2RUR9 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC144AA2RUR9 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC144AA2RUR9 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
CCDC144AA2RUR9 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
CCDC144AA2RUR9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC26.25■■□□□ 1.79
CCDC144AA2RUR9 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC144AA2RUR9 AF238378.1-201ENST00000526806 358 ntBASIC26.25■■□□□ 1.79
CCDC144AA2RUR9 AC126763.1-201ENST00000552015 2118 ntBASIC26.25■■□□□ 1.79
CCDC144AA2RUR9 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
CCDC144AA2RUR9 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC26.25■■□□□ 1.79
CCDC144AA2RUR9 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC26.25■■□□□ 1.79
CCDC144AA2RUR9 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
CCDC144AA2RUR9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC144AA2RUR9 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC144AA2RUR9 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC144AA2RUR9 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC144AA2RUR9 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC144AA2RUR9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC26.25■■□□□ 1.79
CCDC144AA2RUR9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC144AA2RUR9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC26.25■■□□□ 1.79
CCDC144AA2RUR9 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC144AA2RUR9 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC144AA2RUR9 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC144AA2RUR9 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC26.24■■□□□ 1.79
CCDC144AA2RUR9 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC144AA2RUR9 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC144AA2RUR9 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC144AA2RUR9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC144AA2RUR9 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC144AA2RUR9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC144AA2RUR9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
CCDC144AA2RUR9 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC144AA2RUR9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC144AA2RUR9 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC144AA2RUR9 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC144AA2RUR9 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC144AA2RUR9 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC26.23■■□□□ 1.79
CCDC144AA2RUR9 MRPL3P1-201ENST00000400109 1033 ntBASIC26.23■■□□□ 1.79
CCDC144AA2RUR9 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
CCDC144AA2RUR9 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC26.23■■□□□ 1.79
CCDC144AA2RUR9 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
CCDC144AA2RUR9 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC26.23■■□□□ 1.79
CCDC144AA2RUR9 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC144AA2RUR9 CALM3-211ENST00000598871 561 ntTSL 4 BASIC26.23■■□□□ 1.79
CCDC144AA2RUR9 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC26.23■■□□□ 1.79
CCDC144AA2RUR9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC144AA2RUR9 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC26.23■■□□□ 1.79
CCDC144AA2RUR9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms